Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.32□□□□□ -2.04
HLA-DQB2P05538 DNAJC8P1-201ENST00000554535 372 ntBASIC2.32□□□□□ -2.04
HLA-DQB2P05538 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 AC012254.4-201ENST00000588843 273 ntBASIC2.32□□□□□ -2.04
HLA-DQB2P05538 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 RPL23AP92-201ENST00000603609 255 ntBASIC2.32□□□□□ -2.04
HLA-DQB2P05538 AL355802.4-201ENST00000607635 548 ntBASIC2.32□□□□□ -2.04
HLA-DQB2P05538 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 AC091564.4-201ENST00000533934 2194 ntBASIC2.32□□□□□ -2.04
HLA-DQB2P05538 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 MIR449A-201ENST00000362113 91 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 SNORD115-48-201ENST00000364764 76 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 SNORD51.1-201ENST00000365405 77 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 RNU6-730P-201ENST00000383954 104 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 RPS4XP7-201ENST00000406274 780 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AC107081.1-201ENST00000414975 361 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 PNRC2P1-201ENST00000423940 420 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AC096632.1-201ENST00000427395 310 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AL645638.1-201ENST00000440519 361 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AC015908.1-201ENST00000478739 476 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 SEM1P1-201ENST00000506694 209 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 HIGD1AP6-201ENST00000521833 279 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 ERHP1-201ENST00000523006 310 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 MTCYBP20-201ENST00000524239 1129 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AL512310.1-201ENST00000548639 172 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AC004217.3-201ENST00000551552 878 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AC090666.1-201ENST00000578241 445 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AL355812.1-201ENST00000603215 216 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AC009220.3-201ENST00000604318 586 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AC007938.3-201ENST00000604965 623 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 BX322635.1-201ENST00000605804 496 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 AP003122.6-201ENST00000623831 495 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 IGHVIII-44-202ENST00000636235 289 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 MTCO1P18-201ENST00000455518 1419 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQB2P05538 Z99496.1-201ENST00000469424 1477 ntBASIC2.31□□□□□ -2.04
HLA-DQB2P05538 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AL359693.1-201ENST00000614959 2407 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 RNU1-138P-201ENST00000384093 164 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 RNU6-821P-201ENST00000390995 107 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 RNA5SP80-201ENST00000410475 111 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC092638.1-201ENST00000411966 1275 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 HMGN2P35-201ENST00000412164 270 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 UBE2V1P9-201ENST00000414760 368 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 BX682237.1-201ENST00000415016 335 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 ARL2BPP3-201ENST00000421226 480 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AL606495.1-201ENST00000422100 813 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 MTND4P24-201ENST00000424002 397 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 CR769767.1-201ENST00000436337 346 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 HIGD1AP2-201ENST00000446367 280 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC104073.1-201ENST00000451988 151 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 RPL23AP23-201ENST00000452590 471 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 SNORA31.8-201ENST00000516327 108 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 SNORA31.15-201ENST00000516771 132 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 RNA5SP402-201ENST00000517148 110 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC025881.1-201ENST00000518851 512 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 OSBPL9P3-201ENST00000534523 595 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC016542.1-201ENST00000608259 493 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC009570.1-201ENST00000609599 745 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 SNHG22-203ENST00000617833 660 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 MTND2P41-201ENST00000637599 773 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 MTND5P31-201ENST00000419366 1374 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DQB2P05538 AC244517.1-201ENST00000606030 2086 ntBASIC2.3□□□□□ -2.04
HLA-DQB2P05538 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 AC090740.1-201ENST00000623193 2262 ntBASIC2.29□□□□□ -2.04
HLA-DQB2P05538 ZNF271P-202ENST00000465539 1970 ntBASIC2.29□□□□□ -2.04
HLA-DQB2P05538 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DQB2P05538 MIR23A-201ENST00000385245 73 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms