Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC080014.1-201ENST00000496877 1201 ntBASIC3.47□□□□□ -1.85
VTNP04004 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.47□□□□□ -1.85
VTNP04004 OR5H5P-201ENST00000503164 928 ntBASIC3.47□□□□□ -1.85
VTNP04004 AC093767.1-201ENST00000504523 156 ntBASIC3.47□□□□□ -1.85
VTNP04004 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
VTNP04004 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.47□□□□□ -1.85
VTNP04004 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.47□□□□□ -1.85
VTNP04004 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.47□□□□□ -1.85
VTNP04004 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.47□□□□□ -1.85
VTNP04004 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.47□□□□□ -1.85
VTNP04004 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.47□□□□□ -1.85
VTNP04004 RNU1-103P-201ENST00000516502 125 ntBASIC3.47□□□□□ -1.85
VTNP04004 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.47□□□□□ -1.85
VTNP04004 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
VTNP04004 AC022080.3-201ENST00000544433 482 ntBASIC3.47□□□□□ -1.85
VTNP04004 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.47□□□□□ -1.85
VTNP04004 AC091515.1-201ENST00000548110 679 ntBASIC3.47□□□□□ -1.85
VTNP04004 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.47□□□□□ -1.85
VTNP04004 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.47□□□□□ -1.85
VTNP04004 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.47□□□□□ -1.85
VTNP04004 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.47□□□□□ -1.85
VTNP04004 EIF4BP1-201ENST00000554881 351 ntBASIC3.47□□□□□ -1.85
VTNP04004 AC090888.1-201ENST00000561335 1141 ntBASIC3.47□□□□□ -1.85
VTNP04004 AC002400.1-201ENST00000569310 726 ntBASIC3.47□□□□□ -1.85
VTNP04004 MIR4644-201ENST00000579929 84 ntBASIC3.47□□□□□ -1.85
VTNP04004 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.47□□□□□ -1.85
VTNP04004 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.47□□□□□ -1.85
VTNP04004 Z94722.1-201ENST00000604328 474 ntBASIC3.47□□□□□ -1.85
VTNP04004 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.47□□□□□ -1.85
VTNP04004 AC122133.1-201ENST00000613964 233 ntBASIC3.47□□□□□ -1.85
VTNP04004 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.47□□□□□ -1.85
VTNP04004 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
VTNP04004 AC099506.2-201ENST00000623074 221 ntBASIC3.47□□□□□ -1.85
VTNP04004 AC006386.2-201ENST00000624491 75 ntBASIC3.47□□□□□ -1.85
VTNP04004 AC012005.1-201ENST00000624575 75 ntBASIC3.47□□□□□ -1.85
VTNP04004 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VTNP04004 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VTNP04004 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
VTNP04004 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.47□□□□□ -1.85
VTNP04004 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.47□□□□□ -1.85
VTNP04004 AC012321.1-201ENST00000561622 1588 ntBASIC3.46□□□□□ -1.85
VTNP04004 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
VTNP04004 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.46□□□□□ -1.85
VTNP04004 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.46□□□□□ -1.85
VTNP04004 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.46□□□□□ -1.85
VTNP04004 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.85
VTNP04004 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VTNP04004 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VTNP04004 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VTNP04004 RNU6-263P-201ENST00000363811 107 ntBASIC3.46□□□□□ -1.86
VTNP04004 SNORD82-201ENST00000365530 70 ntBASIC3.46□□□□□ -1.86
VTNP04004 SNORA54-201ENST00000384281 123 ntBASIC3.46□□□□□ -1.86
VTNP04004 RNU6-339P-201ENST00000384310 107 ntBASIC3.46□□□□□ -1.86
VTNP04004 MIR634-201ENST00000385208 97 ntBASIC3.46□□□□□ -1.86
VTNP04004 AL024474.1-201ENST00000404655 591 ntBASIC3.46□□□□□ -1.86
VTNP04004 RPL5P18-201ENST00000406671 891 ntBASIC3.46□□□□□ -1.86
VTNP04004 MTND4P6-201ENST00000438297 472 ntBASIC3.46□□□□□ -1.86
VTNP04004 NANOGNBP1-201ENST00000448444 480 ntBASIC3.46□□□□□ -1.86
VTNP04004 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.46□□□□□ -1.86
VTNP04004 TRGVB-201ENST00000453257 471 ntBASIC3.46□□□□□ -1.86
VTNP04004 MTCO3P11-201ENST00000455103 774 ntBASIC3.46□□□□□ -1.86
VTNP04004 ARPC3P2-201ENST00000457786 533 ntBASIC3.46□□□□□ -1.86
VTNP04004 RPS15AP17-201ENST00000470598 390 ntBASIC3.46□□□□□ -1.86
VTNP04004 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.46□□□□□ -1.86
VTNP04004 RNU6-678P-201ENST00000516832 109 ntBASIC3.46□□□□□ -1.86
VTNP04004 AC009812.2-201ENST00000517657 457 ntBASIC3.46□□□□□ -1.86
VTNP04004 IGKV2D-23-201ENST00000518179 286 ntBASIC3.46□□□□□ -1.86
VTNP04004 NDUFB9P3-201ENST00000521269 501 ntBASIC3.46□□□□□ -1.86
VTNP04004 DEFB131D-201ENST00000526803 184 ntBASIC3.46□□□□□ -1.86
VTNP04004 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.46□□□□□ -1.86
VTNP04004 AL139174.1-201ENST00000531489 886 ntBASIC3.46□□□□□ -1.86
VTNP04004 AC007424.1-203ENST00000554613 687 ntBASIC3.46□□□□□ -1.86
VTNP04004 AC107954.1-201ENST00000565906 727 ntBASIC3.46□□□□□ -1.86
VTNP04004 MIR4637-201ENST00000582405 84 ntBASIC3.46□□□□□ -1.86
VTNP04004 AC010928.3-201ENST00000587712 541 ntBASIC3.46□□□□□ -1.86
VTNP04004 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.46□□□□□ -1.86
VTNP04004 AF246928.1-201ENST00000623768 87 ntBASIC3.46□□□□□ -1.86
VTNP04004 MIR3974-201ENST00000637126 96 ntBASIC3.46□□□□□ -1.86
VTNP04004 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
VTNP04004 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VTNP04004 AL079343.1-201ENST00000572358 1771 ntBASIC3.46□□□□□ -1.86
VTNP04004 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.45□□□□□ -1.86
VTNP04004 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.45□□□□□ -1.86
VTNP04004 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.45□□□□□ -1.86
VTNP04004 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VTNP04004 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
VTNP04004 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VTNP04004 AL391994.1-201ENST00000254724 282 ntBASIC3.45□□□□□ -1.86
VTNP04004 Y_RNA.18-201ENST00000362461 102 ntBASIC3.45□□□□□ -1.86
VTNP04004 RNU6-730P-201ENST00000383954 104 ntBASIC3.45□□□□□ -1.86
VTNP04004 Y_RNA.493-201ENST00000384422 102 ntBASIC3.45□□□□□ -1.86
VTNP04004 SNORA44-201ENST00000384584 132 ntBASIC3.45□□□□□ -1.86
VTNP04004 CYCSP45-201ENST00000402289 315 ntBASIC3.45□□□□□ -1.86
VTNP04004 RPS15AP38-201ENST00000413110 372 ntBASIC3.45□□□□□ -1.86
VTNP04004 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.45□□□□□ -1.86
VTNP04004 MTCYBP38-201ENST00000417160 1123 ntBASIC3.45□□□□□ -1.86
VTNP04004 RPL35AP12-201ENST00000425362 338 ntBASIC3.45□□□□□ -1.86
VTNP04004 MTND1P20-201ENST00000430341 950 ntBASIC3.45□□□□□ -1.86
VTNP04004 AL445567.1-201ENST00000439121 144 ntBASIC3.45□□□□□ -1.86
VTNP04004 AC108734.1-201ENST00000439549 399 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms