Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.67□□□□□ -1.82
LDLRP01130 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.67□□□□□ -1.82
LDLRP01130 BX322784.1-201ENST00000455793 1077 ntBASIC3.67□□□□□ -1.82
LDLRP01130 AC087312.1-201ENST00000471411 480 ntBASIC3.67□□□□□ -1.82
LDLRP01130 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LDLRP01130 RPS4XP15-201ENST00000489210 795 ntBASIC3.67□□□□□ -1.82
LDLRP01130 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.67□□□□□ -1.82
LDLRP01130 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.67□□□□□ -1.82
LDLRP01130 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LDLRP01130 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.67□□□□□ -1.82
LDLRP01130 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.67□□□□□ -1.82
LDLRP01130 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.67□□□□□ -1.82
LDLRP01130 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.67□□□□□ -1.82
LDLRP01130 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.67□□□□□ -1.82
LDLRP01130 MIR3611-201ENST00000584484 83 ntBASIC3.67□□□□□ -1.82
LDLRP01130 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.67□□□□□ -1.82
LDLRP01130 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.67□□□□□ -1.82
LDLRP01130 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.67□□□□□ -1.82
LDLRP01130 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
LDLRP01130 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.67□□□□□ -1.82
LDLRP01130 PCMTD1P7-201ENST00000634506 357 ntBASIC3.67□□□□□ -1.82
LDLRP01130 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LDLRP01130 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDLRP01130 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LDLRP01130 SNORA31-201ENST00000362607 130 ntBASIC3.66□□□□□ -1.82
LDLRP01130 RNU6-433P-201ENST00000363216 104 ntBASIC3.66□□□□□ -1.82
LDLRP01130 RNU6-777P-201ENST00000364265 104 ntBASIC3.66□□□□□ -1.82
LDLRP01130 RNA5SP72-201ENST00000364442 117 ntBASIC3.66□□□□□ -1.82
LDLRP01130 AC007066.1-201ENST00000392902 381 ntBASIC3.66□□□□□ -1.82
LDLRP01130 DEFB108C-201ENST00000400154 252 ntBASIC3.66□□□□□ -1.82
LDLRP01130 HSPE1P26-201ENST00000405341 275 ntBASIC3.66□□□□□ -1.82
LDLRP01130 RNU6-920P-201ENST00000410926 92 ntBASIC3.66□□□□□ -1.82
LDLRP01130 Z92545.1-201ENST00000411782 234 ntBASIC3.66□□□□□ -1.82
LDLRP01130 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.66□□□□□ -1.82
LDLRP01130 TPMTP2-201ENST00000414372 726 ntBASIC3.66□□□□□ -1.82
LDLRP01130 MTCO2P34-201ENST00000421994 607 ntBASIC3.66□□□□□ -1.82
LDLRP01130 AC017083.1-201ENST00000428093 483 ntBASIC3.66□□□□□ -1.82
LDLRP01130 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.66□□□□□ -1.82
LDLRP01130 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.66□□□□□ -1.82
LDLRP01130 CYCSP43-201ENST00000438233 310 ntBASIC3.66□□□□□ -1.82
LDLRP01130 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.66□□□□□ -1.82
LDLRP01130 NANOGP10-201ENST00000453325 895 ntBASIC3.66□□□□□ -1.82
LDLRP01130 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.66□□□□□ -1.82
LDLRP01130 OR9M1P-201ENST00000459641 921 ntBASIC3.66□□□□□ -1.82
LDLRP01130 NIPA2P2-201ENST00000496376 1083 ntBASIC3.66□□□□□ -1.82
LDLRP01130 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.66□□□□□ -1.82
LDLRP01130 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.66□□□□□ -1.82
LDLRP01130 CBX3P3-201ENST00000508108 532 ntBASIC3.66□□□□□ -1.82
LDLRP01130 AC079140.3-201ENST00000511111 550 ntBASIC3.66□□□□□ -1.82
LDLRP01130 AC091965.2-201ENST00000512324 613 ntBASIC3.66□□□□□ -1.82
LDLRP01130 RN7SKP209-201ENST00000516888 304 ntBASIC3.66□□□□□ -1.82
LDLRP01130 SUMO2P20-201ENST00000520803 283 ntBASIC3.66□□□□□ -1.82
LDLRP01130 HSPA8P13-201ENST00000523715 472 ntBASIC3.66□□□□□ -1.82
LDLRP01130 OR5D17P-201ENST00000531492 978 ntBASIC3.66□□□□□ -1.82
LDLRP01130 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LDLRP01130 OR6C73P-201ENST00000546432 358 ntBASIC3.66□□□□□ -1.82
LDLRP01130 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.66□□□□□ -1.82
LDLRP01130 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.66□□□□□ -1.82
LDLRP01130 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.66□□□□□ -1.82
LDLRP01130 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.66□□□□□ -1.82
LDLRP01130 AC080013.4-201ENST00000607624 649 ntBASIC3.66□□□□□ -1.82
LDLRP01130 AP001596.2-201ENST00000608410 312 ntBASIC3.66□□□□□ -1.82
LDLRP01130 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LDLRP01130 U73479.1-201ENST00000618062 168 ntBASIC3.66□□□□□ -1.82
LDLRP01130 AC004009.2-201ENST00000623016 728 ntBASIC3.66□□□□□ -1.82
LDLRP01130 AL356266.1-201ENST00000623311 483 ntBASIC3.66□□□□□ -1.82
LDLRP01130 AC068137.3-201ENST00000639191 341 ntBASIC3.66□□□□□ -1.82
LDLRP01130 AC073869.6-201ENST00000640656 341 ntBASIC3.66□□□□□ -1.82
LDLRP01130 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDLRP01130 MTCO1P24-201ENST00000515438 1558 ntBASIC3.66□□□□□ -1.82
LDLRP01130 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDLRP01130 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDLRP01130 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LDLRP01130 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LDLRP01130 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LDLRP01130 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
LDLRP01130 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.65□□□□□ -1.82
LDLRP01130 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
LDLRP01130 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.65□□□□□ -1.83
LDLRP01130 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.65□□□□□ -1.83
LDLRP01130 RPL23AP57-201ENST00000332361 466 ntBASIC3.65□□□□□ -1.83
LDLRP01130 RNU6-462P-201ENST00000362659 105 ntBASIC3.65□□□□□ -1.83
LDLRP01130 RNU6-989P-201ENST00000362756 107 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.65□□□□□ -1.83
LDLRP01130 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.65□□□□□ -1.83
LDLRP01130 RNU2-15P-201ENST00000410692 191 ntBASIC3.65□□□□□ -1.83
LDLRP01130 RNU2-16P-201ENST00000410712 136 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AL663109.1-201ENST00000411498 844 ntBASIC3.65□□□□□ -1.83
LDLRP01130 HSPE1P12-201ENST00000412576 301 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.65□□□□□ -1.83
LDLRP01130 AC002075.2-201ENST00000425207 252 ntBASIC3.65□□□□□ -1.83
LDLRP01130 NEK4P1-201ENST00000433383 879 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms