Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.05□□□□□ -1.92
NPHP4O75161 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.05□□□□□ -1.92
NPHP4O75161 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.05□□□□□ -1.92
NPHP4O75161 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.05□□□□□ -1.92
NPHP4O75161 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.05□□□□□ -1.92
NPHP4O75161 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
NPHP4O75161 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.05□□□□□ -1.92
NPHP4O75161 U6.107-201ENST00000637108 79 ntBASIC3.05□□□□□ -1.92
NPHP4O75161 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
NPHP4O75161 AC008432.1-201ENST00000615912 1320 ntBASIC3.05□□□□□ -1.92
NPHP4O75161 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NPHP4O75161 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NPHP4O75161 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
NPHP4O75161 RNY1P10-201ENST00000363268 113 ntBASIC3.04□□□□□ -1.92
NPHP4O75161 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NPHP4O75161 MTND4LP7-201ENST00000431728 294 ntBASIC3.04□□□□□ -1.92
NPHP4O75161 RPL21P2-201ENST00000440049 481 ntBASIC3.04□□□□□ -1.92
NPHP4O75161 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.04□□□□□ -1.92
NPHP4O75161 RPL21P103-201ENST00000479921 488 ntBASIC3.04□□□□□ -1.92
NPHP4O75161 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.04□□□□□ -1.92
NPHP4O75161 SNORA48.9-201ENST00000516419 162 ntBASIC3.04□□□□□ -1.92
NPHP4O75161 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.04□□□□□ -1.92
NPHP4O75161 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.04□□□□□ -1.92
NPHP4O75161 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
NPHP4O75161 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.04□□□□□ -1.92
NPHP4O75161 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.04□□□□□ -1.92
NPHP4O75161 AC007687.1-201ENST00000602704 304 ntBASIC3.04□□□□□ -1.92
NPHP4O75161 AC138649.5-201ENST00000637456 137 ntBASIC3.04□□□□□ -1.92
NPHP4O75161 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NPHP4O75161 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
NPHP4O75161 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NPHP4O75161 MIR21-201ENST00000362134 72 ntBASIC3.03□□□□□ -1.92
NPHP4O75161 MIR337-201ENST00000362281 93 ntBASIC3.03□□□□□ -1.92
NPHP4O75161 RNU2-37P-201ENST00000410695 177 ntBASIC3.03□□□□□ -1.92
NPHP4O75161 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NPHP4O75161 RPS15AP40-201ENST00000419621 391 ntBASIC3.03□□□□□ -1.92
NPHP4O75161 AC023128.2-201ENST00000420880 1223 ntBASIC3.03□□□□□ -1.92
NPHP4O75161 RPS7P5-201ENST00000441482 581 ntBASIC3.03□□□□□ -1.92
NPHP4O75161 TAF9P1-201ENST00000445421 515 ntBASIC3.03□□□□□ -1.92
NPHP4O75161 TAF9P2-201ENST00000454958 515 ntBASIC3.03□□□□□ -1.92
NPHP4O75161 snoU13.7-201ENST00000459220 104 ntBASIC3.03□□□□□ -1.92
NPHP4O75161 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.03□□□□□ -1.92
NPHP4O75161 RPS27P27-201ENST00000498779 255 ntBASIC3.03□□□□□ -1.92
NPHP4O75161 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.03□□□□□ -1.92
NPHP4O75161 AL451074.6-201ENST00000608512 729 ntBASIC3.03□□□□□ -1.92
NPHP4O75161 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPHP4O75161 AC091046.2-201ENST00000620775 665 ntBASIC3.03□□□□□ -1.92
NPHP4O75161 MIR4278-201ENST00000636094 69 ntBASIC3.03□□□□□ -1.92
NPHP4O75161 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPHP4O75161 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
NPHP4O75161 RNU6-457P-201ENST00000363999 107 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 DNAJC19P6-201ENST00000401853 280 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.02□□□□□ -1.93
NPHP4O75161 HSPE1P26-201ENST00000405341 275 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 AL139156.1-201ENST00000412785 841 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.02□□□□□ -1.93
NPHP4O75161 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP4O75161 TRIM60P13-201ENST00000432350 1283 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP4O75161 HMGN2P21-201ENST00000447764 270 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP4O75161 SNRPGP3-201ENST00000469405 227 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP4O75161 NAMPTP2-201ENST00000505629 1115 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.02□□□□□ -1.93
NPHP4O75161 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP4O75161 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.02□□□□□ -1.93
NPHP4O75161 AC011468.4-201ENST00000603942 409 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 AL160237.3-201ENST00000604114 1013 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 AC018618.2-201ENST00000604770 446 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 AL359821.1-201ENST00000605519 182 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 HMGN2P28-201ENST00000606102 262 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 AC018754.1-201ENST00000607486 925 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 AC025016.1-201ENST00000616746 682 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 MIR6864-201ENST00000617935 70 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 AC006378.2-201ENST00000623178 2476 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 MAPK10-322ENST00000641485 4530 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP4O75161 AC004520.1-201ENST00000608362 1413 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
NPHP4O75161 Y_RNA.116-201ENST00000363292 103 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NPHP4O75161 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
NPHP4O75161 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP4O75161 ARL2BPP3-201ENST00000421226 480 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 MTND4P24-201ENST00000424002 397 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 DPPA2P1-201ENST00000428060 556 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.02□□□□□ -1.93
NPHP4O75161 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NPHP4O75161 AC108078.2-201ENST00000510750 236 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.02□□□□□ -1.93
NPHP4O75161 AC008562.1-201ENST00000521763 330 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 CIR1P1-201ENST00000524055 1133 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.02□□□□□ -1.93
NPHP4O75161 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP4O75161 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.02□□□□□ -1.93
NPHP4O75161 AC011374.2-201ENST00000607135 526 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
NPHP4O75161 AC093591.3-201ENST00000634516 308 ntBASIC3.02□□□□□ -1.93
NPHP4O75161 AC000367.1-201ENST00000452711 1766 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms