Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA12O60330 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA12O60330 RN7SL176P-201ENST00000580352 264 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA12O60330 AC010928.3-201ENST00000587712 541 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 GLUD1P4-201ENST00000590914 418 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA12O60330 AC007014.2-201ENST00000615581 479 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 AC015967.1-201ENST00000619893 476 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 AC006065.6-201ENST00000625201 545 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 MIR3688-2-201ENST00000636963 87 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 MIR1321-201ENST00000637766 79 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 AL445487.1-201ENST00000415694 1580 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 LINC00622-201ENST00000562811 1570 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA12O60330 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA12O60330 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA12O60330 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA12O60330 RNU1-20P-201ENST00000363314 162 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 RNU5E-8P-201ENST00000363502 116 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 MIR558-201ENST00000384920 94 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 RNA5SP372-201ENST00000390836 115 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 RNA5SP146-201ENST00000410743 123 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 AC009237.10-201ENST00000414112 510 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA12O60330 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 RPS20P5-201ENST00000434808 360 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA12O60330 HSFY6P-201ENST00000445573 403 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 DDX3P2-201ENST00000446138 111 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AC073587.1-201ENST00000447093 876 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 HMGN2P21-201ENST00000447764 270 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 AC008481.1-201ENST00000463278 396 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 RPL23AP2-201ENST00000471227 466 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 KLHL2P1-201ENST00000508691 521 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AC023141.12-201ENST00000512399 199 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 ARL2BPP6-201ENST00000512757 439 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 Vault.1-201ENST00000516474 102 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 SNORA31.20-201ENST00000517111 133 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 AC123904.3-201ENST00000547218 814 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AC092325.1-201ENST00000566449 554 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 AC006116.10-201ENST00000591836 581 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 AL670379.6-201ENST00000603753 252 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AL670379.11-201ENST00000604059 253 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AL022099.1-201ENST00000604551 712 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AC008162.1-201ENST00000604718 254 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AL670379.1-201ENST00000604752 252 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AL670379.5-201ENST00000605253 252 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AL670379.12-201ENST00000605291 253 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AL136363.1-201ENST00000605349 337 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AL670379.8-201ENST00000605353 252 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 AL670379.7-201ENST00000605823 252 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA12O60330 AC139769.1-204ENST00000472297 1931 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
PCDHGA12O60330 AC092435.4-201ENST00000623012 4159 ntBASIC4.42□□□□□ -1.7
PCDHGA12O60330 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA12O60330 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PCDHGA12O60330 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA12O60330 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA12O60330 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA12O60330 EOGT-210ENST00000615922 1931 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 AC004520.1-201ENST00000608362 1413 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA12O60330 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA12O60330 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PCDHGA12O60330 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA12O60330 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA12O60330 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA12O60330 SNORA7.2-201ENST00000364446 145 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA12O60330 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA12O60330 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA12O60330 MIR23B-201ENST00000384832 97 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 RPS4XP8-201ENST00000402039 771 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 AL022722.2-201ENST00000402519 180 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 AL136372.1-201ENST00000403060 228 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 TXNP7-201ENST00000406296 293 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 RNA5SP317-201ENST00000410176 116 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 RNA5SP311-201ENST00000411290 116 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 USP9YP27-201ENST00000418455 438 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 PPP1R11P2-201ENST00000423543 382 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 OR2AS1P-201ENST00000427827 319 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 RPL21P112-201ENST00000434403 463 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 AL596276.1-201ENST00000434465 418 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 OR4C10P-201ENST00000434991 931 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms