Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RRP9O43818 AL021368.2-201ENST00000606125 5352 ntBASIC4.22□□□□□ -1.73
RRP9O43818 MTND5P7-201ENST00000413558 1798 ntBASIC4.22□□□□□ -1.73
RRP9O43818 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.22□□□□□ -1.73
RRP9O43818 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.22□□□□□ -1.73
RRP9O43818 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RRP9O43818 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.21□□□□□ -1.74
RRP9O43818 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RRP9O43818 OR4G2P-201ENST00000328113 903 ntBASIC4.21□□□□□ -1.74
RRP9O43818 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RRP9O43818 MIR30E-201ENST00000362104 92 ntBASIC4.21□□□□□ -1.74
RRP9O43818 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
RRP9O43818 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RRP9O43818 CCNG1P1-201ENST00000406783 885 ntBASIC4.21□□□□□ -1.74
RRP9O43818 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RRP9O43818 AL355433.1-201ENST00000422804 300 ntBASIC4.21□□□□□ -1.74
RRP9O43818 CHIAP3-201ENST00000423668 1133 ntBASIC4.21□□□□□ -1.74
RRP9O43818 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.21□□□□□ -1.74
RRP9O43818 AL358934.1-201ENST00000432346 324 ntBASIC4.21□□□□□ -1.74
RRP9O43818 AL049745.1-201ENST00000433953 286 ntBASIC4.21□□□□□ -1.74
RRP9O43818 RPL34P20-201ENST00000442771 351 ntBASIC4.21□□□□□ -1.74
RRP9O43818 RN7SL172P-201ENST00000460535 303 ntBASIC4.21□□□□□ -1.74
RRP9O43818 HMGB1P25-201ENST00000468402 607 ntBASIC4.21□□□□□ -1.74
RRP9O43818 RBM43P1-201ENST00000476891 1081 ntBASIC4.21□□□□□ -1.74
RRP9O43818 AC004924.1-201ENST00000480160 781 ntBASIC4.21□□□□□ -1.74
RRP9O43818 RN7SL629P-201ENST00000489622 285 ntBASIC4.21□□□□□ -1.74
RRP9O43818 FCF1P3-201ENST00000496394 590 ntBASIC4.21□□□□□ -1.74
RRP9O43818 RN7SKP21-201ENST00000516503 220 ntBASIC4.21□□□□□ -1.74
RRP9O43818 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.21□□□□□ -1.74
RRP9O43818 OR4R3P-201ENST00000525084 838 ntBASIC4.21□□□□□ -1.74
RRP9O43818 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.21□□□□□ -1.74
RRP9O43818 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.21□□□□□ -1.74
RRP9O43818 AC105129.1-201ENST00000560250 297 ntBASIC4.21□□□□□ -1.74
RRP9O43818 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.21□□□□□ -1.74
RRP9O43818 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.21□□□□□ -1.74
RRP9O43818 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.21□□□□□ -1.74
RRP9O43818 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.21□□□□□ -1.74
RRP9O43818 AC055876.5-201ENST00000605667 259 ntBASIC4.21□□□□□ -1.74
RRP9O43818 AL591424.2-201ENST00000617023 128 ntBASIC4.21□□□□□ -1.74
RRP9O43818 AC012150.2-201ENST00000621300 544 ntBASIC4.21□□□□□ -1.74
RRP9O43818 AC068880.5-201ENST00000624331 290 ntBASIC4.21□□□□□ -1.74
RRP9O43818 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RRP9O43818 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RRP9O43818 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RRP9O43818 AC110774.1-201ENST00000623567 2018 ntBASIC4.21□□□□□ -1.74
RRP9O43818 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RRP9O43818 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RRP9O43818 SNORA31-201ENST00000362607 130 ntBASIC4.2□□□□□ -1.74
RRP9O43818 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
RRP9O43818 Y_RNA.548-201ENST00000384656 105 ntBASIC4.2□□□□□ -1.74
RRP9O43818 RNU6-114P-201ENST00000384704 105 ntBASIC4.2□□□□□ -1.74
RRP9O43818 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RRP9O43818 GSTA9P-201ENST00000406231 611 ntBASIC4.2□□□□□ -1.74
RRP9O43818 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.2□□□□□ -1.74
RRP9O43818 RNA5SP107-201ENST00000411358 122 ntBASIC4.2□□□□□ -1.74
RRP9O43818 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.2□□□□□ -1.74
RRP9O43818 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.2□□□□□ -1.74
RRP9O43818 PIGFP2-201ENST00000421400 651 ntBASIC4.2□□□□□ -1.74
RRP9O43818 DDX39BP1-205ENST00000422507 192 ntBASIC4.2□□□□□ -1.74
RRP9O43818 EIF1P3-201ENST00000423841 334 ntBASIC4.2□□□□□ -1.74
RRP9O43818 MRPS18BP2-201ENST00000434310 759 ntBASIC4.2□□□□□ -1.74
RRP9O43818 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.2□□□□□ -1.74
RRP9O43818 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RRP9O43818 snoU13.3-201ENST00000459441 104 ntBASIC4.2□□□□□ -1.74
RRP9O43818 RPS27AP17-201ENST00000463344 455 ntBASIC4.2□□□□□ -1.74
RRP9O43818 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.2□□□□□ -1.74
RRP9O43818 COPS8P2-201ENST00000473228 627 ntBASIC4.2□□□□□ -1.74
RRP9O43818 AC055855.1-201ENST00000489563 579 ntBASIC4.2□□□□□ -1.74
RRP9O43818 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.2□□□□□ -1.74
RRP9O43818 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.2□□□□□ -1.74
RRP9O43818 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.2□□□□□ -1.74
RRP9O43818 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.2□□□□□ -1.74
RRP9O43818 MED28P5-201ENST00000528254 438 ntBASIC4.2□□□□□ -1.74
RRP9O43818 BRD9P1-201ENST00000529855 560 ntBASIC4.2□□□□□ -1.74
RRP9O43818 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RRP9O43818 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.2□□□□□ -1.74
RRP9O43818 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RRP9O43818 AC004024.1-201ENST00000549244 247 ntBASIC4.2□□□□□ -1.74
RRP9O43818 AC126177.5-201ENST00000549599 178 ntBASIC4.2□□□□□ -1.74
RRP9O43818 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.2□□□□□ -1.74
RRP9O43818 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.2□□□□□ -1.74
RRP9O43818 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.2□□□□□ -1.74
RRP9O43818 MIR4801-201ENST00000582704 82 ntBASIC4.2□□□□□ -1.74
RRP9O43818 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.2□□□□□ -1.74
RRP9O43818 AC011451.2-201ENST00000604303 598 ntBASIC4.2□□□□□ -1.74
RRP9O43818 AC019176.2-201ENST00000611579 315 ntBASIC4.2□□□□□ -1.74
RRP9O43818 AL121612.2-201ENST00000612261 482 ntBASIC4.2□□□□□ -1.74
RRP9O43818 MIR6891-201ENST00000618788 93 ntBASIC4.2□□□□□ -1.74
RRP9O43818 AC090527.3-201ENST00000619041 548 ntBASIC4.2□□□□□ -1.74
RRP9O43818 AL158209.2-201ENST00000619266 216 ntBASIC4.2□□□□□ -1.74
RRP9O43818 AL732618.1-201ENST00000623251 301 ntBASIC4.2□□□□□ -1.74
RRP9O43818 CR381653.2-201ENST00000624041 768 ntBASIC4.2□□□□□ -1.74
RRP9O43818 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.2□□□□□ -1.74
RRP9O43818 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RRP9O43818 FAM35CP-201ENST00000554755 2470 ntBASIC4.2□□□□□ -1.74
RRP9O43818 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
RRP9O43818 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.19□□□□□ -1.74
RRP9O43818 MIR181A1-201ENST00000385026 110 ntBASIC4.19□□□□□ -1.74
RRP9O43818 RPL23AP32-201ENST00000395315 459 ntBASIC4.19□□□□□ -1.74
RRP9O43818 RPL17P50-201ENST00000396131 546 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms