Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ACTN4O43707 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ACTN4O43707 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ACTN4O43707 ADAM24P-201ENST00000398655 2101 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.31□□□□□ -1.4
ACTN4O43707 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
ACTN4O43707 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.3□□□□□ -1.4
ACTN4O43707 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
ACTN4O43707 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC6.3□□□□□ -1.4
ACTN4O43707 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ACTN4O43707 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ACTN4O43707 RNU4-44P-201ENST00000363050 141 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.3□□□□□ -1.4
ACTN4O43707 RNU6-22P-201ENST00000384355 107 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 Y_RNA.541-201ENST00000384640 113 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 AL133482.1-201ENST00000415988 498 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 DPPA2P2-201ENST00000418220 897 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC6.3□□□□□ -1.4
ACTN4O43707 NXT1P1-201ENST00000458481 316 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 snoU13.7-201ENST00000459220 104 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 AC010631.1-201ENST00000474150 156 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.3□□□□□ -1.4
ACTN4O43707 AC074250.1-201ENST00000511117 192 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 AC113155.1-201ENST00000511141 769 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 MTND5P41-201ENST00000517498 206 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 AC091144.1-201ENST00000519573 138 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.3□□□□□ -1.4
ACTN4O43707 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.3□□□□□ -1.4
ACTN4O43707 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC6.3□□□□□ -1.4
ACTN4O43707 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.3□□□□□ -1.4
ACTN4O43707 MIR5701-3-201ENST00000578890 82 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 CPDP1-201ENST00000579660 283 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 MIR5701-1-201ENST00000585138 82 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 AC005191.1-201ENST00000603950 358 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 TUG1_2.1-201ENST00000614234 87 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 MIR5701-2-201ENST00000615634 82 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC6.3□□□□□ -1.4
ACTN4O43707 CDC27P2-201ENST00000425026 1922 ntBASIC6.3□□□□□ -1.4
ACTN4O43707 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.3□□□□□ -1.4
ACTN4O43707 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ACTN4O43707 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ACTN4O43707 ZNF299P-201ENST00000406845 1804 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ACTN4O43707 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ACTN4O43707 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
ACTN4O43707 EOGT-210ENST00000615922 1931 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ACTN4O43707 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ACTN4O43707 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ACTN4O43707 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ACTN4O43707 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.29□□□□□ -1.4
ACTN4O43707 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.29□□□□□ -1.4
ACTN4O43707 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ACTN4O43707 Y_RNA.8-201ENST00000362353 102 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 Y_RNA.76-201ENST00000362931 109 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 RNVU1-3-201ENST00000364313 161 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.29□□□□□ -1.4
ACTN4O43707 RNU6-804P-201ENST00000384286 107 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ACTN4O43707 AL591034.2-201ENST00000402839 359 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 Y_RNA.626-201ENST00000411288 95 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.29□□□□□ -1.4
ACTN4O43707 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.29□□□□□ -1.4
ACTN4O43707 AL031736.2-201ENST00000426573 787 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 AL159987.2-201ENST00000432754 307 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 TPT1P13-201ENST00000449760 499 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 HLA-DPA3-207ENST00000454398 229 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 RPS24P16-201ENST00000497294 392 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
ACTN4O43707 RNU6-479P-201ENST00000516348 105 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 RNU6-347P-201ENST00000516658 105 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ACTN4O43707 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC6.29□□□□□ -1.4
ACTN4O43707 MIR4433B-201ENST00000581329 102 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.29□□□□□ -1.4
ACTN4O43707 AL078605.1-201ENST00000603529 500 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 AL139124.1-201ENST00000609123 421 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 AC073593.1-201ENST00000624500 411 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ACTN4O43707 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.29□□□□□ -1.4
ACTN4O43707 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ACTN4O43707 PANDAR-201ENST00000629595 1506 ntBASIC6.29□□□□□ -1.4
ACTN4O43707 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ACTN4O43707 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ACTN4O43707 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.29□□□□□ -1.4
ACTN4O43707 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.28□□□□□ -1.4
ACTN4O43707 AP001284.1-201ENST00000528393 2118 ntBASIC6.28□□□□□ -1.4
ACTN4O43707 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
ACTN4O43707 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
ACTN4O43707 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ACTN4O43707 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
ACTN4O43707 SNORA70.6-201ENST00000383934 134 ntBASIC6.28□□□□□ -1.4
ACTN4O43707 Y_RNA.581-201ENST00000391017 97 ntBASIC6.28□□□□□ -1.4
ACTN4O43707 U3.29-201ENST00000391296 212 ntBASIC6.28□□□□□ -1.4
ACTN4O43707 AL590704.1-201ENST00000402856 794 ntBASIC6.28□□□□□ -1.4
ACTN4O43707 AL513475.1-201ENST00000406602 315 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms