Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MTND1P14-201ENST00000427400 950 ntBASIC4.22□□□□□ -1.73
PROM1O43490 PSMA2P3-201ENST00000429685 675 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.22□□□□□ -1.73
PROM1O43490 AL356276.2-201ENST00000435919 558 ntBASIC4.22□□□□□ -1.73
PROM1O43490 USP9YP7-201ENST00000436723 430 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AL353748.1-201ENST00000440753 474 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.22□□□□□ -1.73
PROM1O43490 USP9YP32-201ENST00000452432 430 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AL121877.1-201ENST00000453704 622 ntBASIC4.22□□□□□ -1.73
PROM1O43490 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PROM1O43490 RPL36AP51-201ENST00000487216 318 ntBASIC4.22□□□□□ -1.73
PROM1O43490 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AC093677.1-201ENST00000514414 678 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.22□□□□□ -1.73
PROM1O43490 AC107934.1-201ENST00000522215 217 ntBASIC4.22□□□□□ -1.73
PROM1O43490 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.22□□□□□ -1.73
PROM1O43490 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PROM1O43490 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.22□□□□□ -1.73
PROM1O43490 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.22□□□□□ -1.73
PROM1O43490 AC090615.1-201ENST00000577519 154 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.22□□□□□ -1.73
PROM1O43490 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.22□□□□□ -1.73
PROM1O43490 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PROM1O43490 AC008638.3-201ENST00000603341 463 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AC025588.3-201ENST00000604182 274 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AC010201.1-201ENST00000605051 540 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AC007038.2-201ENST00000608095 740 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AL355472.4-201ENST00000610233 626 ntBASIC4.22□□□□□ -1.73
PROM1O43490 MIR6891-201ENST00000618788 93 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AC010338.1-201ENST00000621823 717 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AC067931.1-201ENST00000624190 671 ntBASIC4.22□□□□□ -1.73
PROM1O43490 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.22□□□□□ -1.73
PROM1O43490 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PROM1O43490 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
PROM1O43490 AC092326.2-201ENST00000624772 1561 ntBASIC4.22□□□□□ -1.73
PROM1O43490 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PROM1O43490 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PROM1O43490 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PROM1O43490 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PROM1O43490 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
PROM1O43490 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PROM1O43490 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
PROM1O43490 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PROM1O43490 RAD17P1-201ENST00000418130 2042 ntBASIC4.21□□□□□ -1.74
PROM1O43490 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PROM1O43490 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.21□□□□□ -1.74
PROM1O43490 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
PROM1O43490 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
PROM1O43490 RNA5SP388-201ENST00000362584 119 ntBASIC4.21□□□□□ -1.74
PROM1O43490 RNA5SP307-201ENST00000362863 116 ntBASIC4.21□□□□□ -1.74
PROM1O43490 Y_RNA.86-201ENST00000363020 111 ntBASIC4.21□□□□□ -1.74
PROM1O43490 Y_RNA.234-201ENST00000364409 97 ntBASIC4.21□□□□□ -1.74
PROM1O43490 RHOT1P2-201ENST00000366423 333 ntBASIC4.21□□□□□ -1.74
PROM1O43490 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
PROM1O43490 RNU6-1011P-201ENST00000384668 107 ntBASIC4.21□□□□□ -1.74
PROM1O43490 MT-TD-201ENST00000387419 68 ntBASIC4.21□□□□□ -1.74
PROM1O43490 ENSAP1-201ENST00000392855 326 ntBASIC4.21□□□□□ -1.74
PROM1O43490 RPL23AP48-201ENST00000406913 488 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.21□□□□□ -1.74
PROM1O43490 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.21□□□□□ -1.74
PROM1O43490 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.21□□□□□ -1.74
PROM1O43490 MRPL50P2-201ENST00000416821 482 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AC004552.1-201ENST00000419089 348 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.21□□□□□ -1.74
PROM1O43490 RPEP3-201ENST00000425462 676 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AL732292.1-201ENST00000426692 226 ntBASIC4.21□□□□□ -1.74
PROM1O43490 FTH1P6-201ENST00000430768 320 ntBASIC4.21□□□□□ -1.74
PROM1O43490 SEPT14P3-201ENST00000439401 183 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.21□□□□□ -1.74
PROM1O43490 AL049734.2-201ENST00000441066 616 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AC114495.1-201ENST00000441274 436 ntBASIC4.21□□□□□ -1.74
PROM1O43490 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.21□□□□□ -1.74
PROM1O43490 CALM1P1-201ENST00000442082 433 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AL732372.2-207ENST00000445840 183 ntBASIC4.21□□□□□ -1.74
PROM1O43490 FDX1P2-201ENST00000450769 375 ntBASIC4.21□□□□□ -1.74
PROM1O43490 SEPT14P2-201ENST00000453405 183 ntBASIC4.21□□□□□ -1.74
PROM1O43490 RAD23BP3-201ENST00000454157 1152 ntBASIC4.21□□□□□ -1.74
PROM1O43490 HMGB3P30-201ENST00000457863 606 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AP000873.1-201ENST00000463987 400 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AC053481.1-201ENST00000467217 306 ntBASIC4.21□□□□□ -1.74
PROM1O43490 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PROM1O43490 RPS26P3-201ENST00000470205 348 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AC090543.2-201ENST00000483963 348 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AC004057.1-201ENST00000485827 348 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.21□□□□□ -1.74
PROM1O43490 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.21□□□□□ -1.74
PROM1O43490 TMEM248P1-201ENST00000510579 951 ntBASIC4.21□□□□□ -1.74
PROM1O43490 SEPT14P4-201ENST00000513445 186 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.21□□□□□ -1.74
PROM1O43490 FO082796.1-201ENST00000523795 183 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.21□□□□□ -1.74
PROM1O43490 AC135001.1-201ENST00000544546 283 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.21□□□□□ -1.74
PROM1O43490 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.21□□□□□ -1.74
PROM1O43490 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.21□□□□□ -1.74
PROM1O43490 AL035413.2-201ENST00000604801 525 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AL136363.1-201ENST00000605349 337 ntBASIC4.21□□□□□ -1.74
PROM1O43490 RNU4-89P-201ENST00000607443 133 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AC020634.1-201ENST00000608701 549 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms