Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL356421.1-201ENST00000403255 413 ntBASIC3.95□□□□□ -1.78
MSI1O43347 RNU2-15P-201ENST00000410692 191 ntBASIC3.95□□□□□ -1.78
MSI1O43347 SNORA57.3-201ENST00000411095 141 ntBASIC3.95□□□□□ -1.78
MSI1O43347 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.95□□□□□ -1.78
MSI1O43347 PSMA2P3-201ENST00000429685 675 ntBASIC3.95□□□□□ -1.78
MSI1O43347 SNORA71B-202ENST00000439232 272 ntBASIC3.95□□□□□ -1.78
MSI1O43347 NOTCH2P1-201ENST00000443481 624 ntBASIC3.95□□□□□ -1.78
MSI1O43347 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.95□□□□□ -1.78
MSI1O43347 RPL7P52-201ENST00000449200 742 ntBASIC3.95□□□□□ -1.78
MSI1O43347 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.95□□□□□ -1.78
MSI1O43347 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.95□□□□□ -1.78
MSI1O43347 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.95□□□□□ -1.78
MSI1O43347 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.95□□□□□ -1.78
MSI1O43347 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.95□□□□□ -1.78
MSI1O43347 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.95□□□□□ -1.78
MSI1O43347 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.95□□□□□ -1.78
MSI1O43347 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.95□□□□□ -1.78
MSI1O43347 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.95□□□□□ -1.78
MSI1O43347 SNORA18.6-201ENST00000516792 115 ntBASIC3.95□□□□□ -1.78
MSI1O43347 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.95□□□□□ -1.78
MSI1O43347 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MSI1O43347 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.95□□□□□ -1.78
MSI1O43347 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.95□□□□□ -1.78
MSI1O43347 MIR4644-201ENST00000579929 84 ntBASIC3.95□□□□□ -1.78
MSI1O43347 HMGN1P30-201ENST00000589286 268 ntBASIC3.95□□□□□ -1.78
MSI1O43347 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.95□□□□□ -1.78
MSI1O43347 MIR486-1-201ENST00000612171 68 ntBASIC3.95□□□□□ -1.78
MSI1O43347 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.95□□□□□ -1.78
MSI1O43347 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.95□□□□□ -1.78
MSI1O43347 AC004825.2-201ENST00000616634 455 ntBASIC3.95□□□□□ -1.78
MSI1O43347 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.95□□□□□ -1.78
MSI1O43347 AC068137.3-201ENST00000639191 341 ntBASIC3.95□□□□□ -1.78
MSI1O43347 AC073869.6-201ENST00000640656 341 ntBASIC3.95□□□□□ -1.78
MSI1O43347 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.95□□□□□ -1.78
MSI1O43347 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MSI1O43347 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MSI1O43347 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
MSI1O43347 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MSI1O43347 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.94□□□□□ -1.78
MSI1O43347 AC024560.2-201ENST00000507981 1497 ntBASIC3.94□□□□□ -1.78
MSI1O43347 AC095050.2-201ENST00000510748 1458 ntBASIC3.94□□□□□ -1.78
MSI1O43347 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
MSI1O43347 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MSI1O43347 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MSI1O43347 RNA5SP258-201ENST00000362750 119 ntBASIC3.94□□□□□ -1.78
MSI1O43347 SNORA70.4-201ENST00000365509 134 ntBASIC3.94□□□□□ -1.78
MSI1O43347 SNORD3H-201ENST00000384486 214 ntBASIC3.94□□□□□ -1.78
MSI1O43347 SNORA70E-201ENST00000384492 135 ntBASIC3.94□□□□□ -1.78
MSI1O43347 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
MSI1O43347 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
MSI1O43347 RNU6ATAC-201ENST00000408749 126 ntBASIC3.94□□□□□ -1.78
MSI1O43347 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.94□□□□□ -1.78
MSI1O43347 AC078974.1-201ENST00000411597 223 ntBASIC3.94□□□□□ -1.78
MSI1O43347 RHEBP3-201ENST00000411920 351 ntBASIC3.94□□□□□ -1.78
MSI1O43347 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.94□□□□□ -1.78
MSI1O43347 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.94□□□□□ -1.78
MSI1O43347 VN1R34P-201ENST00000447387 883 ntBASIC3.94□□□□□ -1.78
MSI1O43347 UBDP1-202ENST00000457888 382 ntBASIC3.94□□□□□ -1.78
MSI1O43347 snoU13.24-201ENST00000458998 104 ntBASIC3.94□□□□□ -1.78
MSI1O43347 AC084198.1-201ENST00000477747 402 ntBASIC3.94□□□□□ -1.78
MSI1O43347 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.94□□□□□ -1.78
MSI1O43347 AL358832.1-201ENST00000497800 389 ntBASIC3.94□□□□□ -1.78
MSI1O43347 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.94□□□□□ -1.78
MSI1O43347 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.94□□□□□ -1.78
MSI1O43347 TMEM248P1-201ENST00000510579 951 ntBASIC3.94□□□□□ -1.78
MSI1O43347 RNU6-430P-201ENST00000517078 107 ntBASIC3.94□□□□□ -1.78
MSI1O43347 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
MSI1O43347 AL157394.1-201ENST00000562983 1224 ntBASIC3.94□□□□□ -1.78
MSI1O43347 AC137800.2-201ENST00000574375 120 ntBASIC3.94□□□□□ -1.78
MSI1O43347 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.94□□□□□ -1.78
MSI1O43347 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.94□□□□□ -1.78
MSI1O43347 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.94□□□□□ -1.78
MSI1O43347 AC244505.7-201ENST00000599675 272 ntBASIC3.94□□□□□ -1.78
MSI1O43347 AL161729.4-201ENST00000604650 476 ntBASIC3.94□□□□□ -1.78
MSI1O43347 SNORA62.6-201ENST00000606322 83 ntBASIC3.94□□□□□ -1.78
MSI1O43347 AC092794.1-201ENST00000612734 582 ntBASIC3.94□□□□□ -1.78
MSI1O43347 AC091925.2-201ENST00000625059 256 ntBASIC3.94□□□□□ -1.78
MSI1O43347 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
MSI1O43347 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MSI1O43347 MFSD8-236ENST00000641509 4050 ntBASIC3.94□□□□□ -1.78
MSI1O43347 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MSI1O43347 AL592437.2-201ENST00000421655 2434 ntBASIC3.94□□□□□ -1.78
MSI1O43347 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
MSI1O43347 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.94□□□□□ -1.78
MSI1O43347 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.94□□□□□ -1.78
MSI1O43347 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.94□□□□□ -1.78
MSI1O43347 ZNF33CP-201ENST00000432492 2030 ntBASIC3.94□□□□□ -1.78
MSI1O43347 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
MSI1O43347 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MSI1O43347 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
MSI1O43347 RNU6-989P-201ENST00000362756 107 ntBASIC3.93□□□□□ -1.78
MSI1O43347 RN7SKP226-201ENST00000364912 300 ntBASIC3.93□□□□□ -1.78
MSI1O43347 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
MSI1O43347 RNU6-1207P-201ENST00000384343 107 ntBASIC3.93□□□□□ -1.78
MSI1O43347 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MSI1O43347 RPL7P60-201ENST00000397636 735 ntBASIC3.93□□□□□ -1.78
MSI1O43347 RPS3AP36-201ENST00000398190 775 ntBASIC3.93□□□□□ -1.78
MSI1O43347 RAD23BP2-201ENST00000416003 1207 ntBASIC3.93□□□□□ -1.78
MSI1O43347 C1DP2-201ENST00000418167 426 ntBASIC3.93□□□□□ -1.78
MSI1O43347 AC005517.2-201ENST00000424673 553 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms