Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 FAM106CP-201ENST00000582212 507 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 MIR7973-1-201ENST00000614683 76 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 MIR6515-201ENST00000619843 57 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AC048347.1-201ENST00000624621 427 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 RNU4-23P-201ENST00000362839 140 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AC083799.1-201ENST00000366451 910 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 MIR142-201ENST00000384835 87 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AL138799.3-201ENST00000438968 350 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AL157827.1-201ENST00000447622 132 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 RNA5SP385-201ENST00000515947 110 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AL731537.2-201ENST00000561565 951 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AC084373.1-201ENST00000603311 235 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 SNRPGP19-201ENST00000603826 189 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AC138473.1-201ENST00000605717 526 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AC242628.1-201ENST00000606810 391 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AC004241.3-201ENST00000611728 517 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AC016911.1-201ENST00000613297 452 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AC145207.9-201ENST00000623802 325 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AL513331.1-201ENST00000411908 397 ntBASIC1.76□□□□□ -2.13
COL6A6A6NMZ7 MUPP-201ENST00000438111 566 ntBASIC1.76□□□□□ -2.13
COL6A6A6NMZ7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.76□□□□□ -2.13
COL6A6A6NMZ7 AC104564.1-201ENST00000493028 407 ntBASIC1.76□□□□□ -2.13
COL6A6A6NMZ7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.76□□□□□ -2.13
COL6A6A6NMZ7 SNORA48.9-201ENST00000516419 162 ntBASIC1.76□□□□□ -2.13
COL6A6A6NMZ7 AP000889.2-201ENST00000532684 490 ntBASIC1.76□□□□□ -2.13
COL6A6A6NMZ7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.76□□□□□ -2.13
COL6A6A6NMZ7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.76□□□□□ -2.13
COL6A6A6NMZ7 AC002984.1-201ENST00000591692 448 ntBASIC1.76□□□□□ -2.13
COL6A6A6NMZ7 BNIP3P7-201ENST00000605641 516 ntBASIC1.76□□□□□ -2.13
COL6A6A6NMZ7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
COL6A6A6NMZ7 AC092326.2-201ENST00000624772 1561 ntBASIC1.76□□□□□ -2.13
COL6A6A6NMZ7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 RNU6-1-201ENST00000383898 107 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 RNU6-42P-201ENST00000384165 107 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 RNU6-36P-201ENST00000384172 107 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 RNU6-4P-201ENST00000384205 107 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 RNU6-5P-201ENST00000384238 107 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 RNU6-3P-201ENST00000384314 107 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 RNU6-2-201ENST00000384627 107 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 RNU6-9-201ENST00000384776 107 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 RNU6-33P-201ENST00000384793 107 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 HMGB1P11-201ENST00000413899 637 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 RPS3AP9-201ENST00000417027 792 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC099336.2-201ENST00000422457 254 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC027124.2-201ENST00000428249 105 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 HMGB1P27-201ENST00000431429 603 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 UBE2V1P5-201ENST00000440070 405 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC009238.1-201ENST00000442165 424 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC009237.6-201ENST00000446969 424 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 GSTA11P-201ENST00000452866 669 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC008571.1-201ENST00000467232 300 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 RNU6-751P-201ENST00000516382 101 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC068714.1-201ENST00000559623 800 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 WISP1-OT1-201ENST00000602893 642 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 RNU6-6P-201ENST00000606623 107 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC007620.3-201ENST00000608131 497 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC011978.2-201ENST00000569835 2054 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 ZNF355P-201ENST00000427301 3216 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 TRGV6-201ENST00000417928 299 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 ATP5F1P1-201ENST00000433775 569 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 SNX5P1-201ENST00000505757 1041 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 TTC39CP1-201ENST00000512513 755 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 RNA5SP309-201ENST00000516670 106 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 AC069234.5-201ENST00000611056 416 ntBASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL6A6A6NMZ7 RNA5SP498-201ENST00000411342 120 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 RPL26P37-201ENST00000411983 438 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AC009302.1-201ENST00000417147 390 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AC244453.4-201ENST00000419150 388 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AC073310.1-201ENST00000423226 1033 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 CALM1P2-201ENST00000452941 448 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AP000705.1-201ENST00000454567 350 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 RNU7-27P-201ENST00000459281 62 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 RPL23AP44-201ENST00000482216 473 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms