Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC128657.1-201ENST00000549459 145 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AC060780.2-201ENST00000589047 198 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AC060780.3-201ENST00000589464 80 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AC020634.1-201ENST00000608701 549 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AC107294.1-201ENST00000609524 467 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AL020991.1-201ENST00000612314 373 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AL353748.2-201ENST00000622148 471 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 BMS1P21-201ENST00000634565 365 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AL365440.1-201ENST00000436135 2167 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 MTCO1P12-201ENST00000414273 1543 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 AL136964.1-201ENST00000622038 2990 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 RNU6-1284P-201ENST00000363701 100 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 RNY3P3-201ENST00000363816 102 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 RNU6-877P-201ENST00000383868 107 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 RNVU1-14-201ENST00000384770 164 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 MIR1-2-201ENST00000384961 85 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 RNU6-1158P-201ENST00000391167 107 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 RNA5SP107-201ENST00000411358 122 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 AC016691.1-201ENST00000441321 413 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 AL162389.1-201ENST00000449233 177 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 MTCYBP18-201ENST00000501056 747 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 RNU7-51P-201ENST00000516560 62 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 OR4R1P-201ENST00000529879 463 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 PDCD5P1-201ENST00000543528 309 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 AL121579.1-201ENST00000555129 305 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 MIR6715A-201ENST00000615929 79 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 AL359757.2-201ENST00000624309 274 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 MIR4275-201ENST00000636486 87 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 CKAP2P1-201ENST00000555477 2049 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 AC138907.8-201ENST00000623981 2256 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 DDX10P1-201ENST00000448545 1933 ntBASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CCDC85CA6NKD9 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 ZNF285B-201ENST00000561698 1767 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AL136164.3-201ENST00000624429 3978 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 RNU5E-4P-201ENST00000364931 120 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 Y_RNA.367-201ENST00000365544 101 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC138393.2-201ENST00000414742 246 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC244098.2-201ENST00000422068 99 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 VTI1BP4-201ENST00000427516 527 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 HMGN2P31-201ENST00000432430 273 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 BTF3P10-201ENST00000433415 495 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AL451139.1-201ENST00000434718 346 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 RPL36AP6-201ENST00000435770 321 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 SEPT14P3-201ENST00000439401 183 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AL732372.2-207ENST00000445840 183 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC006480.1-201ENST00000449887 378 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 SEPT14P2-201ENST00000453405 183 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 ABCC13-202ENST00000463099 3842 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 SEPT14P4-201ENST00000513445 186 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC097486.1-201ENST00000515331 210 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms