Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.8□□□□□ -2.12
CNOT1A5YKK6 RNU6-250P-201ENST00000516958 103 ntBASIC1.8□□□□□ -2.12
CNOT1A5YKK6 AP002748.2-201ENST00000528671 348 ntBASIC1.8□□□□□ -2.12
CNOT1A5YKK6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.8□□□□□ -2.12
CNOT1A5YKK6 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.8□□□□□ -2.12
CNOT1A5YKK6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CNOT1A5YKK6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.8□□□□□ -2.12
CNOT1A5YKK6 AC008568.2-201ENST00000623862 2313 ntBASIC1.8□□□□□ -2.12
CNOT1A5YKK6 SAR1AP4-201ENST00000429225 591 ntBASIC1.8□□□□□ -2.12
CNOT1A5YKK6 SNRPFP2-201ENST00000440710 251 ntBASIC1.8□□□□□ -2.12
CNOT1A5YKK6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.8□□□□□ -2.12
CNOT1A5YKK6 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.8□□□□□ -2.12
CNOT1A5YKK6 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.8□□□□□ -2.12
CNOT1A5YKK6 AL035411.2-201ENST00000604022 421 ntBASIC1.8□□□□□ -2.12
CNOT1A5YKK6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CNOT1A5YKK6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.79□□□□□ -2.12
CNOT1A5YKK6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.79□□□□□ -2.12
CNOT1A5YKK6 MTND4LP22-201ENST00000508209 276 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 AL137100.2-201ENST00000555786 315 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 MIR151B-201ENST00000584249 96 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 AC083899.3-201ENST00000603413 594 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 AL512598.1-201ENST00000610158 273 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
CNOT1A5YKK6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.79□□□□□ -2.12
CNOT1A5YKK6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CNOT1A5YKK6 RNA5SP295-201ENST00000362655 121 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 DEFB109C-201ENST00000382575 264 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 DEFB109B-201ENST00000382656 264 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 GSTA12P-201ENST00000402398 508 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 RNU6-516P-201ENST00000411381 104 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 HMGB1P31-201ENST00000437242 427 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.79□□□□□ -2.12
CNOT1A5YKK6 GSTA11P-201ENST00000452866 669 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 CFTRP1-201ENST00000456646 183 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 RPS29P11-201ENST00000496507 171 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 AP003467.2-201ENST00000520175 319 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.79□□□□□ -2.12
CNOT1A5YKK6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.79□□□□□ -2.12
CNOT1A5YKK6 AL391646.1-201ENST00000603860 190 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 AC107294.3-201ENST00000609211 526 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 AC048347.1-201ENST00000624621 427 ntBASIC1.79□□□□□ -2.12
CNOT1A5YKK6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CNOT1A5YKK6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CNOT1A5YKK6 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.78□□□□□ -2.12
CNOT1A5YKK6 NEK4P1-201ENST00000433383 879 ntBASIC1.78□□□□□ -2.12
CNOT1A5YKK6 SNX5P1-201ENST00000505757 1041 ntBASIC1.78□□□□□ -2.12
CNOT1A5YKK6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.78□□□□□ -2.12
CNOT1A5YKK6 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.78□□□□□ -2.12
CNOT1A5YKK6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.78□□□□□ -2.12
CNOT1A5YKK6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.78□□□□□ -2.12
CNOT1A5YKK6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CNOT1A5YKK6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
CNOT1A5YKK6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CNOT1A5YKK6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CNOT1A5YKK6 SNORA7.1-201ENST00000363750 139 ntBASIC1.78□□□□□ -2.12
CNOT1A5YKK6 MIR124-3-201ENST00000384866 87 ntBASIC1.78□□□□□ -2.12
CNOT1A5YKK6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
CNOT1A5YKK6 RN7SKP123-201ENST00000410732 291 ntBASIC1.78□□□□□ -2.12
CNOT1A5YKK6 AL358453.1-201ENST00000422522 250 ntBASIC1.78□□□□□ -2.12
CNOT1A5YKK6 TRIAP1P1-201ENST00000427062 225 ntBASIC1.78□□□□□ -2.12
CNOT1A5YKK6 MUPP-201ENST00000438111 566 ntBASIC1.78□□□□□ -2.12
CNOT1A5YKK6 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.78□□□□□ -2.12
CNOT1A5YKK6 SULT1C2P1-202ENST00000562418 459 ntBASIC1.78□□□□□ -2.12
CNOT1A5YKK6 OR10AB1P-201ENST00000609613 938 ntBASIC1.78□□□□□ -2.12
CNOT1A5YKK6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.78□□□□□ -2.12
CNOT1A5YKK6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
CNOT1A5YKK6 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.77□□□□□ -2.13
CNOT1A5YKK6 RNU1-138P-201ENST00000384093 164 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 DNAJC19P6-201ENST00000401853 280 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 AC007390.1-201ENST00000415722 356 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.77□□□□□ -2.13
CNOT1A5YKK6 AC098583.1-201ENST00000480875 255 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 AC012170.1-201ENST00000495139 359 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 RNA5SP385-201ENST00000515947 110 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.77□□□□□ -2.13
CNOT1A5YKK6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.77□□□□□ -2.13
CNOT1A5YKK6 AC069234.5-201ENST00000611056 416 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 MIR4278-201ENST00000636094 69 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.77□□□□□ -2.13
CNOT1A5YKK6 MTND4P23-201ENST00000447723 1363 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 DCAF13P1-201ENST00000495256 1330 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 AC099336.2-201ENST00000422457 254 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 RPL23AP44-201ENST00000482216 473 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 OR4P1P-201ENST00000530808 1136 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 AL031274.2-201ENST00000599419 203 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 MIR8081-201ENST00000611533 95 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CNOT1A5YKK6 AC103988.1-201ENST00000566382 2177 ntBASIC1.77□□□□□ -2.13
CNOT1A5YKK6 RLIMP2-201ENST00000427891 1563 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 SNORD21-201ENST00000383953 95 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 RPS27P5-201ENST00000444247 244 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 CBWD4P-201ENST00000445695 655 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 CDC42P1-201ENST00000456658 548 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms