Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubb4aQ9D6F9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Gm26571-201ENSMUST00000181399 666 ntBASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubb4aQ9D6F9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.66■□□□□ 0.42
Tubb4aQ9D6F9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb4aQ9D6F9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb4aQ9D6F9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb4aQ9D6F9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb4aQ9D6F9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb4aQ9D6F9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb4aQ9D6F9 Gm27405-201ENSMUST00000184201 112 ntBASIC17.66■□□□□ 0.42
Tubb4aQ9D6F9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tubb4aQ9D6F9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb4aQ9D6F9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb4aQ9D6F9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb4aQ9D6F9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubb4aQ9D6F9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Gm10849-201ENSMUST00000100397 618 ntBASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubb4aQ9D6F9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb4aQ9D6F9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb4aQ9D6F9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.63■□□□□ 0.41
Tubb4aQ9D6F9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb4aQ9D6F9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb4aQ9D6F9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb4aQ9D6F9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb4aQ9D6F9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Tubb4aQ9D6F9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb4aQ9D6F9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb4aQ9D6F9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb4aQ9D6F9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.63■□□□□ 0.41
Tubb4aQ9D6F9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms