Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Gm5643-201ENSMUST00000117081 966 ntBASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Gm15378-201ENSMUST00000121894 207 ntBASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdh18Q8VHR0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdh18Q8VHR0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh18Q8VHR0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh18Q8VHR0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms