Protein–RNA interactions for Protein: Q8BYR1

Lcmt2, tRNA wybutosine-synthesizing protein 4, mousemouse

Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt2Q8BYR1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lcmt2Q8BYR1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lcmt2Q8BYR1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Gm13559-201ENSMUST00000120476 863 ntBASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Gm43799-201ENSMUST00000201845 579 ntBASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lcmt2Q8BYR1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lcmt2Q8BYR1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Lcmt2Q8BYR1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lcmt2Q8BYR1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lcmt2Q8BYR1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lcmt2Q8BYR1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lcmt2Q8BYR1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Lcmt2Q8BYR1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lcmt2Q8BYR1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lcmt2Q8BYR1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lcmt2Q8BYR1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Lcmt2Q8BYR1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lcmt2Q8BYR1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lcmt2Q8BYR1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lcmt2Q8BYR1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lcmt2Q8BYR1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lcmt2Q8BYR1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms