Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.95□□□□□ -0.18
Fndc4Q3TR08 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Fndc4Q3TR08 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Timm23-208ENSMUST00000226683 750 ntBASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.94□□□□□ -0.18
Fndc4Q3TR08 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fndc4Q3TR08 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Gm17661-201ENSMUST00000170317 270 ntBASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Odf3b-204ENSMUST00000227834 930 ntBASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fndc4Q3TR08 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms