Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vamp3P63024 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Vamp3P63024 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vamp3P63024 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vamp3P63024 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vamp3P63024 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vamp3P63024 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vamp3P63024 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vamp3P63024 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.6□□□□□ -0.39
Vamp3P63024 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vamp3P63024 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vamp3P63024 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.59□□□□□ -0.39
Vamp3P63024 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vamp3P63024 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.59□□□□□ -0.39
Vamp3P63024 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.59□□□□□ -0.39
Vamp3P63024 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vamp3P63024 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.59□□□□□ -0.39
Vamp3P63024 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vamp3P63024 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.59□□□□□ -0.39
Vamp3P63024 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.59□□□□□ -0.39
Vamp3P63024 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vamp3P63024 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vamp3P63024 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vamp3P63024 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
Vamp3P63024 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vamp3P63024 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.58□□□□□ -0.4
Vamp3P63024 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vamp3P63024 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vamp3P63024 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vamp3P63024 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vamp3P63024 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.58□□□□□ -0.4
Vamp3P63024 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vamp3P63024 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vamp3P63024 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.58□□□□□ -0.4
Vamp3P63024 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.58□□□□□ -0.4
Vamp3P63024 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vamp3P63024 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vamp3P63024 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vamp3P63024 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.57□□□□□ -0.4
Vamp3P63024 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Vamp3P63024 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vamp3P63024 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Vamp3P63024 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.57□□□□□ -0.4
Vamp3P63024 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Vamp3P63024 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.57□□□□□ -0.4
Vamp3P63024 Gm40881-201ENSMUST00000223397 166 ntBASIC12.57□□□□□ -0.4
Vamp3P63024 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Vamp3P63024 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Vamp3P63024 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Vamp3P63024 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vamp3P63024 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms