Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC11.68□□□□□ -0.54
Cks1bP61025 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.68□□□□□ -0.54
Cks1bP61025 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.68□□□□□ -0.54
Cks1bP61025 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.68□□□□□ -0.54
Cks1bP61025 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC11.68□□□□□ -0.54
Cks1bP61025 AC140264.2-202ENSMUST00000218746 817 ntBASIC11.68□□□□□ -0.54
Cks1bP61025 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.68□□□□□ -0.54
Cks1bP61025 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cks1bP61025 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 AC108858.1-201ENSMUST00000228461 1498 ntBASIC11.68□□□□□ -0.54
Cks1bP61025 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cks1bP61025 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cks1bP61025 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cks1bP61025 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Cks1bP61025 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.67□□□□□ -0.54
Cks1bP61025 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.67□□□□□ -0.54
Cks1bP61025 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cks1bP61025 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC11.67□□□□□ -0.54
Cks1bP61025 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.67□□□□□ -0.54
Cks1bP61025 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.67□□□□□ -0.54
Cks1bP61025 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cks1bP61025 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cks1bP61025 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.67□□□□□ -0.54
Cks1bP61025 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.67□□□□□ -0.54
Cks1bP61025 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1bP61025 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cks1bP61025 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cks1bP61025 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.66□□□□□ -0.54
Cks1bP61025 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Cks1bP61025 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Cks1bP61025 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.66□□□□□ -0.54
Cks1bP61025 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Cks1bP61025 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.66□□□□□ -0.54
Cks1bP61025 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.66□□□□□ -0.54
Cks1bP61025 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Cks1bP61025 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.66□□□□□ -0.54
Cks1bP61025 Gm16401-202ENSMUST00000197463 2074 ntBASIC11.66□□□□□ -0.54
Cks1bP61025 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms