Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 REXO1L6P-202ENST00000619970 1078 ntBASIC21.91■■□□□ 1.1
TM4SF4P48230 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.91■■□□□ 1.1
TM4SF4P48230 AC112497.1-201ENST00000624824 639 ntBASIC21.91■■□□□ 1.1
TM4SF4P48230 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TM4SF4P48230 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.9■■□□□ 1.1
TM4SF4P48230 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF4P48230 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF4P48230 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.9■■□□□ 1.1
TM4SF4P48230 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF4P48230 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF4P48230 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF4P48230 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.9■■□□□ 1.1
TM4SF4P48230 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.9■■□□□ 1.1
TM4SF4P48230 AF238378.1-201ENST00000526806 358 ntBASIC21.9■■□□□ 1.1
TM4SF4P48230 KRT18P58-201ENST00000527480 1120 ntBASIC21.9■■□□□ 1.1
TM4SF4P48230 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.9■■□□□ 1.1
TM4SF4P48230 IGHV3-41-201ENST00000613121 348 ntBASIC21.9■■□□□ 1.1
TM4SF4P48230 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.9■■□□□ 1.1
TM4SF4P48230 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.9■■□□□ 1.1
TM4SF4P48230 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF4P48230 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.9■■□□□ 1.1
TM4SF4P48230 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF4P48230 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF4P48230 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF4P48230 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.9■■□□□ 1.1
TM4SF4P48230 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.9■■□□□ 1.1
TM4SF4P48230 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
TM4SF4P48230 LINC00167-201ENST00000530583 1419 ntBASIC21.89■■□□□ 1.1
TM4SF4P48230 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
TM4SF4P48230 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
TM4SF4P48230 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF4P48230 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.89■■□□□ 1.09
TM4SF4P48230 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
TM4SF4P48230 SLC25A1P1-201ENST00000528351 927 ntBASIC21.89■■□□□ 1.09
TM4SF4P48230 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.89■■□□□ 1.09
TM4SF4P48230 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
TM4SF4P48230 Z69720.1-201ENST00000601483 472 ntBASIC21.89■■□□□ 1.09
TM4SF4P48230 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF4P48230 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF4P48230 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF4P48230 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF4P48230 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
TM4SF4P48230 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF4P48230 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.88■■□□□ 1.09
TM4SF4P48230 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF4P48230 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF4P48230 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF4P48230 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
TM4SF4P48230 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TM4SF4P48230 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF4P48230 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.88■■□□□ 1.09
TM4SF4P48230 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF4P48230 MIR1233-2-201ENST00000408138 82 ntBASIC21.88■■□□□ 1.09
TM4SF4P48230 MIR1233-1-201ENST00000408722 82 ntBASIC21.88■■□□□ 1.09
TM4SF4P48230 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.88■■□□□ 1.09
TM4SF4P48230 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.88■■□□□ 1.09
TM4SF4P48230 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF4P48230 AC092865.5-201ENST00000545435 363 ntBASIC21.88■■□□□ 1.09
TM4SF4P48230 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
TM4SF4P48230 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF4P48230 AC005332.3-201ENST00000589904 676 ntBASIC21.88■■□□□ 1.09
TM4SF4P48230 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF4P48230 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.88■■□□□ 1.09
TM4SF4P48230 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF4P48230 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF4P48230 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF4P48230 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF4P48230 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.88■■□□□ 1.09
TM4SF4P48230 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TM4SF4P48230 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.87■■□□□ 1.09
TM4SF4P48230 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TM4SF4P48230 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.87■■□□□ 1.09
TM4SF4P48230 AF106564.1-201ENST00000607058 2553 ntBASIC21.87■■□□□ 1.09
TM4SF4P48230 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TM4SF4P48230 FAM220CP-201ENST00000395253 831 ntBASIC21.87■■□□□ 1.09
TM4SF4P48230 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.87■■□□□ 1.09
TM4SF4P48230 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.87■■□□□ 1.09
TM4SF4P48230 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TM4SF4P48230 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.87■■□□□ 1.09
TM4SF4P48230 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.87■■□□□ 1.09
TM4SF4P48230 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.87■■□□□ 1.09
TM4SF4P48230 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TM4SF4P48230 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TM4SF4P48230 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TM4SF4P48230 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TM4SF4P48230 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.86■■□□□ 1.09
TM4SF4P48230 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TM4SF4P48230 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TM4SF4P48230 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TM4SF4P48230 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.86■■□□□ 1.09
TM4SF4P48230 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TM4SF4P48230 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TM4SF4P48230 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.86■■□□□ 1.09
TM4SF4P48230 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
TM4SF4P48230 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.86■■□□□ 1.09
TM4SF4P48230 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.86■■□□□ 1.09
TM4SF4P48230 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.86■■□□□ 1.09
TM4SF4P48230 MCCD1P1-208ENST00000445732 328 ntBASIC21.86■■□□□ 1.09
TM4SF4P48230 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.86■■□□□ 1.09
TM4SF4P48230 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms