Protein–RNA interactions for Protein: P34928

Apoc1, Apolipoprotein C-I, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc1P34928 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Apoc1P34928 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Apoc1P34928 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Apoc1P34928 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Apoc1P34928 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Apoc1P34928 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Apoc1P34928 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Apoc1P34928 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.25□□□□□ -0.13
Apoc1P34928 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.24□□□□□ -0.13
Apoc1P34928 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Apoc1P34928 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.24□□□□□ -0.13
Apoc1P34928 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Apoc1P34928 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Apoc1P34928 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.24□□□□□ -0.13
Apoc1P34928 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 Gm27463-201ENSMUST00000183569 57 ntBASIC14.24□□□□□ -0.13
Apoc1P34928 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Apoc1P34928 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Apoc1P34928 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Apoc1P34928 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.23□□□□□ -0.13
Apoc1P34928 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.23□□□□□ -0.13
Apoc1P34928 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.23□□□□□ -0.13
Apoc1P34928 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Apoc1P34928 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Apoc1P34928 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Apoc1P34928 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Apoc1P34928 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Gm715-201ENSMUST00000117865 831 ntBASIC14.22□□□□□ -0.13
Apoc1P34928 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.22□□□□□ -0.13
Apoc1P34928 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.22□□□□□ -0.13
Apoc1P34928 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Apoc1P34928 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Apoc1P34928 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Apoc1P34928 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Apoc1P34928 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Apoc1P34928 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Apoc1P34928 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Apoc1P34928 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Apoc1P34928 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.21□□□□□ -0.13
Apoc1P34928 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Apoc1P34928 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Apoc1P34928 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Apoc1P34928 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Apoc1P34928 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Apoc1P34928 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Apoc1P34928 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Apoc1P34928 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.21□□□□□ -0.13
Apoc1P34928 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Apoc1P34928 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.21□□□□□ -0.13
Apoc1P34928 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.21□□□□□ -0.13
Apoc1P34928 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms