Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afxP27661 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afxP27661 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
H2afxP27661 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H2afxP27661 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
H2afxP27661 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.15■□□□□ 0.34
H2afxP27661 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afxP27661 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afxP27661 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H2afxP27661 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afxP27661 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H2afxP27661 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.15■□□□□ 0.34
H2afxP27661 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afxP27661 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afxP27661 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.15■□□□□ 0.34
H2afxP27661 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afxP27661 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afxP27661 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
H2afxP27661 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afxP27661 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
H2afxP27661 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afxP27661 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afxP27661 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afxP27661 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
H2afxP27661 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.14■□□□□ 0.33
H2afxP27661 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.14■□□□□ 0.33
H2afxP27661 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.14■□□□□ 0.33
H2afxP27661 Gm27000-201ENSMUST00000182943 842 ntBASIC17.14■□□□□ 0.33
H2afxP27661 Gm27454-201ENSMUST00000185090 204 ntBASIC17.14■□□□□ 0.33
H2afxP27661 Gm7291-201ENSMUST00000199147 382 ntBASIC17.14■□□□□ 0.33
H2afxP27661 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.14■□□□□ 0.33
H2afxP27661 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
H2afxP27661 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
H2afxP27661 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afxP27661 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
H2afxP27661 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
H2afxP27661 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afxP27661 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afxP27661 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afxP27661 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afxP27661 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afxP27661 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afxP27661 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afxP27661 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afxP27661 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afxP27661 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afxP27661 Gm13241-201ENSMUST00000094493 780 ntBASIC17.13■□□□□ 0.33
H2afxP27661 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2afxP27661 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afxP27661 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
H2afxP27661 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afxP27661 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afxP27661 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2afxP27661 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afxP27661 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afxP27661 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
H2afxP27661 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afxP27661 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
H2afxP27661 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.12■□□□□ 0.33
H2afxP27661 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
H2afxP27661 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.12■□□□□ 0.33
H2afxP27661 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.12■□□□□ 0.33
H2afxP27661 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afxP27661 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
H2afxP27661 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afxP27661 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.11■□□□□ 0.33
H2afxP27661 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afxP27661 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
H2afxP27661 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2afxP27661 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afxP27661 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afxP27661 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2afxP27661 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
H2afxP27661 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afxP27661 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms