Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
ATF3P18847 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC26.36■■□□□ 1.81
ATF3P18847 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
ATF3P18847 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ATF3P18847 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ATF3P18847 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATF3P18847 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATF3P18847 AL023284.2-201ENST00000405850 579 ntBASIC26.35■■□□□ 1.81
ATF3P18847 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC26.35■■□□□ 1.81
ATF3P18847 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC26.35■■□□□ 1.81
ATF3P18847 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
ATF3P18847 MIR3917-201ENST00000580971 93 ntBASIC26.35■■□□□ 1.81
ATF3P18847 TK1-205ENST00000590862 642 ntTSL 3 BASIC26.35■■□□□ 1.81
ATF3P18847 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
ATF3P18847 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC26.35■■□□□ 1.81
ATF3P18847 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATF3P18847 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC26.35■■□□□ 1.81
ATF3P18847 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ATF3P18847 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
ATF3P18847 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATF3P18847 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATF3P18847 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATF3P18847 BAALC-202ENST00000306391 243 ntTSL 5 BASIC26.34■■□□□ 1.81
ATF3P18847 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATF3P18847 BAALC-204ENST00000330955 222 ntTSL 5 BASIC26.34■■□□□ 1.81
ATF3P18847 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
ATF3P18847 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC26.34■■□□□ 1.81
ATF3P18847 AC090616.6-201ENST00000582640 721 ntBASIC26.34■■□□□ 1.81
ATF3P18847 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC26.34■■□□□ 1.81
ATF3P18847 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATF3P18847 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
ATF3P18847 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATF3P18847 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC26.34■■□□□ 1.81
ATF3P18847 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.34■■□□□ 1.81
ATF3P18847 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ATF3P18847 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
ATF3P18847 LINC00167-201ENST00000530583 1419 ntBASIC26.33■■□□□ 1.81
ATF3P18847 Z83836.1-201ENST00000624605 1642 ntBASIC26.33■■□□□ 1.81
ATF3P18847 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATF3P18847 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC26.33■■□□□ 1.81
ATF3P18847 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATF3P18847 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
ATF3P18847 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATF3P18847 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC26.33■■□□□ 1.81
ATF3P18847 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ATF3P18847 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC26.33■■□□□ 1.81
ATF3P18847 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC26.33■■□□□ 1.81
ATF3P18847 MIR3180-5-201ENST00000583743 153 ntBASIC26.33■■□□□ 1.81
ATF3P18847 AC099336.1-202ENST00000602961 463 ntBASIC26.33■■□□□ 1.81
ATF3P18847 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC26.33■■□□□ 1.81
ATF3P18847 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ATF3P18847 IL9RP2-201ENST00000423948 1312 ntBASIC26.33■■□□□ 1.81
ATF3P18847 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
ATF3P18847 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATF3P18847 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATF3P18847 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
ATF3P18847 AKR1C7P-201ENST00000305623 895 ntBASIC26.32■■□□□ 1.8
ATF3P18847 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC26.32■■□□□ 1.8
ATF3P18847 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC26.32■■□□□ 1.8
ATF3P18847 AC092183.1-201ENST00000469884 875 ntBASIC26.32■■□□□ 1.8
ATF3P18847 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC26.32■■□□□ 1.8
ATF3P18847 AC064862.7-201ENST00000604520 867 ntBASIC26.32■■□□□ 1.8
ATF3P18847 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC26.32■■□□□ 1.8
ATF3P18847 AC112497.1-201ENST00000624824 639 ntBASIC26.32■■□□□ 1.8
ATF3P18847 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ATF3P18847 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ATF3P18847 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ATF3P18847 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATF3P18847 UBC-206ENST00000538617 1303 ntTSL 5 BASIC26.32■■□□□ 1.8
ATF3P18847 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ATF3P18847 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
ATF3P18847 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC26.31■■□□□ 1.8
ATF3P18847 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC26.31■■□□□ 1.8
ATF3P18847 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ATF3P18847 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
ATF3P18847 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ATF3P18847 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ATF3P18847 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ATF3P18847 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC26.31■■□□□ 1.8
ATF3P18847 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC26.31■■□□□ 1.8
ATF3P18847 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC26.31■■□□□ 1.8
ATF3P18847 PPIE-208ENST00000470213 927 ntTSL 3 BASIC26.31■■□□□ 1.8
ATF3P18847 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC26.31■■□□□ 1.8
ATF3P18847 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
ATF3P18847 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ATF3P18847 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC26.31■■□□□ 1.8
ATF3P18847 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ATF3P18847 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
ATF3P18847 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC26.31■■□□□ 1.8
ATF3P18847 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
ATF3P18847 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC26.31■■□□□ 1.8
ATF3P18847 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ATF3P18847 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ATF3P18847 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ATF3P18847 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ATF3P18847 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ATF3P18847 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC26.3■■□□□ 1.8
ATF3P18847 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC26.3■■□□□ 1.8
ATF3P18847 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC26.3■■□□□ 1.8
ATF3P18847 ABR-204ENST00000543210 1049 ntTSL 2 BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms