Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SP9P0CG40 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SP9P0CG40 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SP9P0CG40 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.89■□□□□ 0.61
SP9P0CG40 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SP9P0CG40 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
SP9P0CG40 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SP9P0CG40 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SP9P0CG40 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SP9P0CG40 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SP9P0CG40 AL023284.2-201ENST00000405850 579 ntBASIC18.89■□□□□ 0.61
SP9P0CG40 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.89■□□□□ 0.61
SP9P0CG40 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.89■□□□□ 0.61
SP9P0CG40 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.89■□□□□ 0.61
SP9P0CG40 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SP9P0CG40 REXO1L6P-202ENST00000619970 1078 ntBASIC18.89■□□□□ 0.61
SP9P0CG40 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.89■□□□□ 0.61
SP9P0CG40 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.89■□□□□ 0.61
SP9P0CG40 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SP9P0CG40 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.89■□□□□ 0.61
SP9P0CG40 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.89■□□□□ 0.61
SP9P0CG40 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SP9P0CG40 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SP9P0CG40 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SP9P0CG40 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SP9P0CG40 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SP9P0CG40 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.89■□□□□ 0.61
SP9P0CG40 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SP9P0CG40 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SP9P0CG40 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SP9P0CG40 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SP9P0CG40 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.88■□□□□ 0.61
SP9P0CG40 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.88■□□□□ 0.61
SP9P0CG40 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.88■□□□□ 0.61
SP9P0CG40 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SP9P0CG40 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.88■□□□□ 0.61
SP9P0CG40 AF238378.1-201ENST00000526806 358 ntBASIC18.88■□□□□ 0.61
SP9P0CG40 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.88■□□□□ 0.61
SP9P0CG40 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.88■□□□□ 0.61
SP9P0CG40 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SP9P0CG40 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.88■□□□□ 0.61
SP9P0CG40 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SP9P0CG40 Z69720.1-201ENST00000601483 472 ntBASIC18.88■□□□□ 0.61
SP9P0CG40 AL773604.1-201ENST00000617417 272 ntBASIC18.88■□□□□ 0.61
SP9P0CG40 TP73-AS1-207ENST00000624167 988 ntBASIC18.88■□□□□ 0.61
SP9P0CG40 AC112497.1-201ENST00000624824 639 ntBASIC18.88■□□□□ 0.61
SP9P0CG40 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.88■□□□□ 0.61
SP9P0CG40 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SP9P0CG40 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SP9P0CG40 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SP9P0CG40 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SP9P0CG40 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.88■□□□□ 0.61
SP9P0CG40 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SP9P0CG40 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SP9P0CG40 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SP9P0CG40 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SP9P0CG40 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
SP9P0CG40 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SP9P0CG40 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SP9P0CG40 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SP9P0CG40 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.87■□□□□ 0.61
SP9P0CG40 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.87■□□□□ 0.61
SP9P0CG40 POLD2P1-201ENST00000511220 997 ntBASIC18.87■□□□□ 0.61
SP9P0CG40 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.87■□□□□ 0.61
SP9P0CG40 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.87■□□□□ 0.61
SP9P0CG40 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.87■□□□□ 0.61
SP9P0CG40 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.87■□□□□ 0.61
SP9P0CG40 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SP9P0CG40 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SP9P0CG40 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.87■□□□□ 0.61
SP9P0CG40 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.87■□□□□ 0.61
SP9P0CG40 MIR3180-5-201ENST00000583743 153 ntBASIC18.87■□□□□ 0.61
SP9P0CG40 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.87■□□□□ 0.61
SP9P0CG40 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.87■□□□□ 0.61
SP9P0CG40 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.87■□□□□ 0.61
SP9P0CG40 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.87■□□□□ 0.61
SP9P0CG40 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.87■□□□□ 0.61
SP9P0CG40 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SP9P0CG40 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.86■□□□□ 0.61
SP9P0CG40 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.86■□□□□ 0.61
SP9P0CG40 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SP9P0CG40 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.86■□□□□ 0.61
SP9P0CG40 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.86■□□□□ 0.61
SP9P0CG40 AC005332.3-201ENST00000589904 676 ntBASIC18.86■□□□□ 0.61
SP9P0CG40 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.86■□□□□ 0.61
SP9P0CG40 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.86■□□□□ 0.61
SP9P0CG40 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms