Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01739 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01739 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
P01739 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01739 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
P01739 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01739 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01739 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01739 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.32□□□□□ -0.44
P01739 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
P01739 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.32□□□□□ -0.44
P01739 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.32□□□□□ -0.44
P01739 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.32□□□□□ -0.44
P01739 Gm18115-201ENSMUST00000221209 621 ntBASIC12.32□□□□□ -0.44
P01739 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
P01739 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.32□□□□□ -0.44
P01739 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
P01739 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.32□□□□□ -0.44
P01739 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01739 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.31□□□□□ -0.44
P01739 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
P01739 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
P01739 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.31□□□□□ -0.44
P01739 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
P01739 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.31□□□□□ -0.44
P01739 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
P01739 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
P01739 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
P01739 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
P01739 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
P01739 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.31□□□□□ -0.44
P01739 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
P01739 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.31□□□□□ -0.44
P01739 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01739 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
P01739 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.3□□□□□ -0.44
P01739 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.3□□□□□ -0.44
P01739 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.3□□□□□ -0.44
P01739 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
P01739 Gm13436-201ENSMUST00000120418 567 ntBASIC12.3□□□□□ -0.44
P01739 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.3□□□□□ -0.44
P01739 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.3□□□□□ -0.44
P01739 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P01739 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms