Protein–RNA interactions for Protein: J3QP08

H2al1k, Histone H2A, mousemouse

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1kJ3QP08 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
H2al1kJ3QP08 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
H2al1kJ3QP08 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H2al1kJ3QP08 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
H2al1kJ3QP08 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H2al1kJ3QP08 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
H2al1kJ3QP08 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
H2al1kJ3QP08 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H2al1kJ3QP08 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H2al1kJ3QP08 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H2al1kJ3QP08 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H2al1kJ3QP08 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H2al1kJ3QP08 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
H2al1kJ3QP08 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
H2al1kJ3QP08 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
H2al1kJ3QP08 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
H2al1kJ3QP08 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
H2al1kJ3QP08 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.4□□□□□ -0.91
H2al1kJ3QP08 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
H2al1kJ3QP08 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
H2al1kJ3QP08 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC9.4□□□□□ -0.91
H2al1kJ3QP08 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
H2al1kJ3QP08 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
H2al1kJ3QP08 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
H2al1kJ3QP08 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H2al1kJ3QP08 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
H2al1kJ3QP08 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
H2al1kJ3QP08 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
H2al1kJ3QP08 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
H2al1kJ3QP08 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H2al1kJ3QP08 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
H2al1kJ3QP08 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
H2al1kJ3QP08 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
H2al1kJ3QP08 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H2al1kJ3QP08 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
H2al1kJ3QP08 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
H2al1kJ3QP08 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms