Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ccdc141E9Q8Q6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ccdc141E9Q8Q6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC24.45■■□□□ 1.5
Ccdc141E9Q8Q6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ccdc141E9Q8Q6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Ccdc141E9Q8Q6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ccdc141E9Q8Q6 AC155252.2-201ENSMUST00000226946 680 ntBASIC24.45■■□□□ 1.5
Ccdc141E9Q8Q6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ccdc141E9Q8Q6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Ccdc141E9Q8Q6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ccdc141E9Q8Q6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Gm13127-201ENSMUST00000118978 1389 ntBASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc141E9Q8Q6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC24.43■■□□□ 1.5
Ccdc141E9Q8Q6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ccdc141E9Q8Q6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ccdc141E9Q8Q6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ccdc141E9Q8Q6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ccdc141E9Q8Q6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ccdc141E9Q8Q6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ccdc141E9Q8Q6 Gm7787-201ENSMUST00000216858 688 ntBASIC24.43■■□□□ 1.5
Ccdc141E9Q8Q6 AC139382.1-201ENSMUST00000221402 498 ntBASIC24.43■■□□□ 1.5
Ccdc141E9Q8Q6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Ccdc141E9Q8Q6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ccdc141E9Q8Q6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ccdc141E9Q8Q6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ccdc141E9Q8Q6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc141E9Q8Q6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc141E9Q8Q6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc141E9Q8Q6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC24.42■■□□□ 1.5
Ccdc141E9Q8Q6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc141E9Q8Q6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc141E9Q8Q6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc141E9Q8Q6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc141E9Q8Q6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Gm15358-201ENSMUST00000119249 520 ntBASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Gm18489-201ENSMUST00000172565 551 ntBASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Gm5312-201ENSMUST00000203728 547 ntBASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Gm45747-201ENSMUST00000212203 999 ntBASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Gm13332-201ENSMUST00000120451 1398 ntBASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Ccdc141E9Q8Q6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Gm11745-201ENSMUST00000121669 448 ntBASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 AA543401-201ENSMUST00000164248 1269 ntBASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc141E9Q8Q6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ccdc141E9Q8Q6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
Ccdc141E9Q8Q6 Gm5366-201ENSMUST00000215494 1338 ntBASIC24.39■■□□□ 1.5
Ccdc141E9Q8Q6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.5
Ccdc141E9Q8Q6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Ccdc141E9Q8Q6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ccdc141E9Q8Q6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ccdc141E9Q8Q6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ccdc141E9Q8Q6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
Ccdc141E9Q8Q6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
Ccdc141E9Q8Q6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC24.39■■□□□ 1.49
Ccdc141E9Q8Q6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Ccdc141E9Q8Q6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ccdc141E9Q8Q6 Gm38318-201ENSMUST00000195769 1706 ntBASIC24.38■■□□□ 1.49
Ccdc141E9Q8Q6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ccdc141E9Q8Q6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC24.38■■□□□ 1.49
Ccdc141E9Q8Q6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ccdc141E9Q8Q6 Gm12892-201ENSMUST00000117367 1146 ntBASIC24.38■■□□□ 1.49
Ccdc141E9Q8Q6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms