Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap99A0A140LIX9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Gm15372-201ENSMUST00000120729 834 ntBASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Gm11452-201ENSMUST00000122376 690 ntBASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Gm18733-201ENSMUST00000173950 856 ntBASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Gm18195-201ENSMUST00000207604 706 ntBASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap99A0A140LIX9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cfap99A0A140LIX9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap99A0A140LIX9 Phf7-203ENSMUST00000226565 1971 ntBASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms