Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv3A0A0A6YYE2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv3A0A0A6YYE2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv3A0A0A6YYE2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv3A0A0A6YYE2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Rab3c-203ENSMUST00000224180 967 ntBASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv3A0A0A6YYE2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trbv3A0A0A6YYE2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Gm18671-201ENSMUST00000214826 683 ntBASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv3A0A0A6YYE2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.61□□□□□ -0.39
Trbv3A0A0A6YYE2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv3A0A0A6YYE2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv3A0A0A6YYE2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv3A0A0A6YYE2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv3A0A0A6YYE2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv3A0A0A6YYE2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv3A0A0A6YYE2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv3A0A0A6YYE2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv3A0A0A6YYE2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv3A0A0A6YYE2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv3A0A0A6YYE2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv3A0A0A6YYE2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv3A0A0A6YYE2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv3A0A0A6YYE2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms