Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 SFR1P1-201ENST00000403720 688 ntBASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 snoU13.3-201ENST00000459441 104 ntBASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 AC025459.1-201ENST00000504072 156 ntBASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 RNA5SP458-201ENST00000516188 119 ntBASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 AP004371.1-201ENST00000525240 214 ntBASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 OR4R2P-201ENST00000530815 597 ntBASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 DNAJC8P1-201ENST00000554535 372 ntBASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 AC011374.2-201ENST00000607135 526 ntBASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 AC092650.2-201ENST00000619984 902 ntBASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 AL512646.1-201ENST00000269395 1077 ntBASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 DEFB109C-201ENST00000382575 264 ntBASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 DEFB109B-201ENST00000382656 264 ntBASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 SNORA11.4-201ENST00000408823 129 ntBASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 SNRPEP4-201ENST00000435815 279 ntBASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 UBE2V1P5-201ENST00000440070 405 ntBASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 MTND2P26-201ENST00000528255 1029 ntBASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 MTCYBP28-201ENST00000566728 1132 ntBASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 SNORD84-203ENST00000584275 78 ntBASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 AC245517.5-201ENST00000611529 162 ntBASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 MIR7111-201ENST00000619751 72 ntBASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 CYP3A51P-201ENST00000633513 256 ntBASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.39□□□□□ -2.03
SCN10AQ9Y5Y9 RNU6-799P-201ENST00000363567 107 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 RNU6-819P-201ENST00000364116 107 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 RPL7P52-201ENST00000449200 742 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 AC093392.2-201ENST00000450682 337 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 AK6P1-201ENST00000540219 478 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 AC090695.1-201ENST00000561269 1222 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 AC023043.3-201ENST00000593113 385 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 AL109653.1-201ENST00000603091 248 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 AP003122.6-201ENST00000623831 495 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 OR5H15-201ENST00000383696 930 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 SNORD59.2-201ENST00000516873 68 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 AC239860.2-201ENST00000525886 270 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 AL163153.1-201ENST00000554223 283 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 AC110792.4-201ENST00000609843 298 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 AC104237.2-201ENST00000612456 443 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 VN1R7P-201ENST00000619242 903 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 AC093591.3-201ENST00000634516 308 ntBASIC2.38□□□□□ -2.03
SCN10AQ9Y5Y9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 MTCO1P9-201ENST00000505577 1534 ntBASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 RNF138P1-201ENST00000502765 546 ntBASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 AC108157.1-201ENST00000510511 539 ntBASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 RNA5SP385-201ENST00000515947 110 ntBASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 HSPE1P18-201ENST00000517602 280 ntBASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 AC019159.1-201ENST00000605094 187 ntBASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 AL590282.1-201ENST00000610379 1136 ntBASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SCN10AQ9Y5Y9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 MTND5P29-201ENST00000458676 1807 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 RNU1-51P-201ENST00000365345 176 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 SNORA17.3-201ENST00000391159 129 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 TPTE2P6-202ENST00000445572 1007 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms