Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 AC026523.2-201ENST00000625039 7739 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AC068870.1-201ENST00000563737 2455 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 ZNF72P-201ENST00000425869 1908 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 Y_RNA.14-201ENST00000362415 103 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 RN7SKP185-201ENST00000362813 326 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 SNORD73A-201ENST00000386062 65 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 MT-TW-201ENST00000387382 68 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 RNU6-607P-201ENST00000411283 108 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 MTCO3P19-201ENST00000415864 321 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 RPS20P1-201ENST00000434853 354 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AL590399.6-201ENST00000446396 307 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 RPL12P20-201ENST00000475538 479 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AC012158.1-204ENST00000483430 465 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AC008694.2-201ENST00000517591 306 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AL359219.2-201ENST00000555184 348 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AC067852.4-201ENST00000590314 478 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 RPS29P30-201ENST00000600975 111 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 FAM27E4-201ENST00000605259 342 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AC024884.1-201ENST00000620583 399 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AC073593.1-201ENST00000624500 411 ntBASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA11Q9Y5H2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 Y_RNA.376-201ENST00000365638 108 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 RNU6-76P-201ENST00000384060 104 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 Y_RNA.478-201ENST00000384358 107 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 AL109941.1-201ENST00000401925 229 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 AC063979.1-201ENST00000415539 377 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 ELOCP20-201ENST00000422460 345 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 UBE2D3P2-201ENST00000424409 445 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 CHEK2P4-201ENST00000450340 246 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 snoU13.3-201ENST00000459441 104 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 RN7SL197P-201ENST00000466981 299 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 RPL7P51-201ENST00000490532 749 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 AC025458.1-201ENST00000506046 166 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 HMGN2P36-201ENST00000529541 409 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 AP000648.1-201ENST00000529682 397 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 CBX3P8-201ENST00000532412 525 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 AC126177.3-201ENST00000551839 688 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 LRRC37A5P-203ENST00000580181 585 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 COX6CP7-201ENST00000597056 208 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 HMGB1P50-201ENST00000605814 607 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 AL355810.1-201ENST00000614629 552 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 SNORD39.4-201ENST00000620099 78 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms