Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC105914.1-201ENST00000511798 226 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AC114797.1-201ENST00000514003 728 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 RNU6-64P-201ENST00000517119 105 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AP000827.1-201ENST00000527814 258 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AC109635.3-201ENST00000529536 185 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AC105233.3-201ENST00000531125 744 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AL512360.1-201ENST00000555346 234 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AL133241.1-201ENST00000556832 487 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 BNIP3P5-201ENST00000562290 498 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AC093249.4-201ENST00000564755 259 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AC025678.1-201ENST00000567861 338 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 HMGB1P6-201ENST00000569046 646 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AC068135.2-201ENST00000569293 1028 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AC006504.3-201ENST00000586818 523 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AL391646.1-201ENST00000603860 190 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AP001330.5-201ENST00000607176 411 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AL450472.3-201ENST00000615578 367 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 TAB3P1-202ENST00000452645 1634 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 OR5J1P-201ENST00000313544 939 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC073343.1-201ENST00000328239 651 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 RNA5SP502-201ENST00000362694 119 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 RNU6-511P-201ENST00000363496 107 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 RNA5SP513-201ENST00000364648 118 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 RNU1-39P-201ENST00000383897 165 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 SNORD115-47-201ENST00000391226 86 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 HDGFP1-201ENST00000405943 252 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AL356387.2-201ENST00000422272 243 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 USP12PX-201ENST00000432383 1057 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 RPL36AP6-201ENST00000435770 321 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC090774.1-201ENST00000435925 246 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 HMGB3P12-201ENST00000438745 556 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 MTCO3P45-201ENST00000443036 613 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 NUTF2P7-201ENST00000453086 375 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AL645939.1-201ENST00000453429 797 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC027673.1-201ENST00000456245 405 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 RPL38P1-201ENST00000460914 211 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AL121769.1-201ENST00000469473 401 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC010618.1-201ENST00000469924 477 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 MLLT10P2-201ENST00000506434 249 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC093824.1-201ENST00000508796 343 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC007016.1-201ENST00000512110 244 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 FAM60DP-201ENST00000524174 632 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC010928.3-201ENST00000587712 541 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 GLUD1P4-201ENST00000590914 418 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC012409.3-201ENST00000611343 981 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC007014.2-201ENST00000615581 479 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC015967.1-201ENST00000619893 476 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 AC011944.2-201ENST00000624440 683 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 MIR3688-2-201ENST00000636963 87 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 MIR1321-201ENST00000637766 79 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 OR52H1-202ENST00000641796 1061 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC00622-201ENST00000562811 1570 ntBASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA3Q9Y5H0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC006971.1-201ENST00000407916 4486 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 RNU1-108P-201ENST00000362556 161 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 RNU5E-8P-201ENST00000363502 116 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 MIR558-201ENST00000384920 94 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms