Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 AL162377.2-201ENST00000624532 337 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 AC068769.1-201ENST00000474767 2426 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 PWAR1-201ENST00000624188 2414 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 AL662795.2-201ENST00000624252 3706 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 AC138907.8-201ENST00000623981 2256 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 AL137141.1-201ENST00000624622 4836 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.21□□□□□ -1.41
VPS9D1Q9Y2B5 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.21□□□□□ -1.41
VPS9D1Q9Y2B5 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.21□□□□□ -1.41
VPS9D1Q9Y2B5 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.21□□□□□ -1.41
VPS9D1Q9Y2B5 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 RN7SKP184-201ENST00000362348 333 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 RNU6-729P-201ENST00000384399 107 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 AF186996.5-201ENST00000418098 904 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 AC099677.1-201ENST00000420575 175 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 AL356121.1-201ENST00000442911 156 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 AC009237.7-201ENST00000447357 229 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 AC117440.1-201ENST00000474107 571 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 RPS27P20-201ENST00000492051 246 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 RNU5E-3P-201ENST00000515913 68 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 RN7SKP179-201ENST00000516126 217 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 SNORA74.1-201ENST00000516320 180 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 AC103783.1-201ENST00000520506 373 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 DEFB131C-201ENST00000528817 165 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 BPIFA4P-203ENST00000603168 689 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 RPL23AP88-201ENST00000605759 454 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 AC139769.1-204ENST00000472297 1931 ntBASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS9D1Q9Y2B5 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 AL731532.1-201ENST00000623972 4236 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 RN7SKP227-201ENST00000364445 330 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 RNU6-76P-201ENST00000384060 104 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 RNU6-318P-201ENST00000384283 103 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 RPS4XP3-201ENST00000398541 413 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 NME1P1-201ENST00000420914 382 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 WARS2P1-201ENST00000429678 537 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 AC245291.3-201ENST00000443400 292 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 HIGD1AP2-201ENST00000446367 280 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 KF459542.1-201ENST00000450908 553 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 snoU13.7-201ENST00000459220 104 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 AC044810.1-201ENST00000480271 711 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 RNU6-589P-201ENST00000516485 107 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 CR383656.7-201ENST00000548164 174 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 RN7SL475P-201ENST00000583379 298 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 AC005191.1-201ENST00000603950 358 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 AC011603.4-201ENST00000611325 277 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 AP001541.1-201ENST00000623322 1904 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 MAPK10-338ENST00000641647 3362 ntBASIC6.2□□□□□ -1.42
VPS9D1Q9Y2B5 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms