Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 AC007529.1-201ENST00000418574 2178 ntBASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 IQCB2P-201ENST00000401788 1633 ntBASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 AC114774.1-201ENST00000507410 1770 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 XIAPP3-201ENST00000312918 795 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 AL121886.1-201ENST00000358609 435 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 RNU4-44P-201ENST00000363050 141 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 RNU6-306P-201ENST00000384617 107 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 Y_RNA.552-201ENST00000384665 112 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 SNORD70.1-201ENST00000391007 85 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 EIF4EP1-201ENST00000422311 642 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 CALM2P2-201ENST00000428512 440 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 AC005094.1-201ENST00000440420 368 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 RPS17P13-201ENST00000448974 407 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 RPL30P11-201ENST00000495304 339 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 SCARNA16.2-201ENST00000516520 172 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 AL451044.1-201ENST00000604867 238 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 AL589994.2-201ENST00000621124 579 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 DNM1P47-203ENST00000571780 12667 ntBASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.35□□□□□ -1.39
ZC3H4Q9UPT8 AC011933.2-201ENST00000578539 2790 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 Y_RNA.2-201ENST00000362330 96 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 Y_RNA.396-201ENST00000383949 103 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 Y_RNA.485-201ENST00000384395 102 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 AC069213.2-201ENST00000420238 366 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 AC105402.2-201ENST00000438503 358 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 RPL34P20-201ENST00000442771 351 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 MED28P3-201ENST00000444288 531 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 Z95327.1-201ENST00000446082 482 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 RN7SL604P-201ENST00000492589 296 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 RPL22P13-201ENST00000493291 347 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 RN7SL244P-201ENST00000493405 297 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 RNU6-323P-201ENST00000521915 107 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 AC060780.2-201ENST00000589047 198 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 AC107871.2-201ENST00000612894 502 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 AC104118.1-201ENST00000607625 1589 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 AL031119.1-201ENST00000404707 1879 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 Z95327.2-201ENST00000414579 1873 ntBASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ZC3H4Q9UPT8 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
ZC3H4Q9UPT8 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 RNU6-960P-201ENST00000364056 120 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 RNU1-115P-201ENST00000365329 160 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 RNU6-128P-201ENST00000383976 107 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 Y_RNA.424-201ENST00000384063 103 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 RNU1-136P-201ENST00000384181 164 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 Y_RNA.447-201ENST00000384184 113 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 RNU6-713P-201ENST00000384761 107 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AL583834.1-201ENST00000406943 343 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 RNA5SP111-201ENST00000411386 101 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 USMG5P1-201ENST00000425964 177 ntBASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.33□□□□□ -1.4
ZC3H4Q9UPT8 AC091180.1-201ENST00000462104 372 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms