Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC034229.4-201ENST00000607861 441 ntBASIC6□□□□□ -1.45
SHROOM4Q9ULL8 uc_338.1-201ENST00000612113 180 ntBASIC6□□□□□ -1.45
SHROOM4Q9ULL8 ALG13-230ENST00000623189 458 ntTSL 3 BASIC6□□□□□ -1.45
SHROOM4Q9ULL8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM4Q9ULL8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM4Q9ULL8 AC021755.1-201ENST00000559747 1447 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 RN7SKP56-201ENST00000410513 331 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 RN7SKP220-201ENST00000410611 288 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 MTCO2P5-201ENST00000422621 426 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 MTCO3P20-201ENST00000454926 688 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 RPS4XP13-201ENST00000483219 789 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 YWHAEP4-201ENST00000505390 198 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 PCBP2P3-201ENST00000509726 843 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 RNU5A-4P-201ENST00000516588 111 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 MAGOH2P-202ENST00000584384 429 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 NRBF2P5-201ENST00000603087 788 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 AC025588.2-201ENST00000604851 466 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 AC128687.1-201ENST00000605304 619 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 AC018755.4-201ENST00000619715 454 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 AC097714.1-201ENST00000511272 1647 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 AP000776.1-201ENST00000530032 1663 ntBASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SHROOM4Q9ULL8 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHROOM4Q9ULL8 RNU6-621P-201ENST00000364752 109 ntBASIC5.98□□□□□ -1.45
SHROOM4Q9ULL8 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.98□□□□□ -1.45
SHROOM4Q9ULL8 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.98□□□□□ -1.45
SHROOM4Q9ULL8 RAD23BP2-201ENST00000416003 1207 ntBASIC5.98□□□□□ -1.45
SHROOM4Q9ULL8 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.98□□□□□ -1.45
SHROOM4Q9ULL8 MTND3P1-201ENST00000441336 220 ntBASIC5.98□□□□□ -1.45
SHROOM4Q9ULL8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.98□□□□□ -1.45
SHROOM4Q9ULL8 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.98□□□□□ -1.45
SHROOM4Q9ULL8 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.98□□□□□ -1.45
SHROOM4Q9ULL8 AC010738.1-201ENST00000604970 987 ntBASIC5.98□□□□□ -1.45
SHROOM4Q9ULL8 AL592221.1-201ENST00000605266 382 ntBASIC5.98□□□□□ -1.45
SHROOM4Q9ULL8 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.98□□□□□ -1.45
SHROOM4Q9ULL8 AP001350.1-201ENST00000601906 1524 ntBASIC5.98□□□□□ -1.45
SHROOM4Q9ULL8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 MIR607-201ENST00000385241 96 ntBASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 MTATP6P27-201ENST00000416987 621 ntBASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 MUPP-201ENST00000438111 566 ntBASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 AC097493.1-201ENST00000463958 372 ntBASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 RN7SL432P-201ENST00000484057 298 ntBASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 TMEM251P1-201ENST00000503717 318 ntBASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 COX7A2P2-201ENST00000505291 250 ntBASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 SCARNA20.6-201ENST00000517251 106 ntBASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 VN1R82P-201ENST00000601481 356 ntBASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 AL034351.1-201ENST00000605288 668 ntBASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 AC025588.4-201ENST00000615802 908 ntBASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SHROOM4Q9ULL8 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 U3.12-201ENST00000364498 214 ntBASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 SNORD51-201ENST00000384320 80 ntBASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 HMGB1P17-201ENST00000403495 628 ntBASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 RPS24P7-201ENST00000416921 246 ntBASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 MTND4LP10-201ENST00000435146 291 ntBASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 TXNP1-201ENST00000441872 371 ntBASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 Y_RNA.638-201ENST00000459374 113 ntBASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 RN7SKP265-201ENST00000516448 223 ntBASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 SNORD84-203ENST00000584275 78 ntBASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 VN1R78P-201ENST00000597393 564 ntBASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 AC013244.3-201ENST00000605614 388 ntBASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 AC006963.1-201ENST00000624003 1052 ntBASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 ZNF876P-202ENST00000398732 1485 ntBASIC5.96□□□□□ -1.45
SHROOM4Q9ULL8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 AP002088.1-201ENST00000382740 395 ntBASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 USP9YP33-201ENST00000412220 421 ntBASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms