Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCNL1Q9UK58 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.47□□□□□ -1.69
CCNL1Q9UK58 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCNL1Q9UK58 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCNL1Q9UK58 AC007656.2-201ENST00000624902 4547 ntBASIC4.47□□□□□ -1.69
CCNL1Q9UK58 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCNL1Q9UK58 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.46□□□□□ -1.69
CCNL1Q9UK58 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.46□□□□□ -1.69
CCNL1Q9UK58 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 RNU6-952P-201ENST00000391164 108 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AL357075.1-201ENST00000404107 726 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 RPL5P18-201ENST00000406671 891 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 MTHFD2P2-201ENST00000407725 247 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 Y_RNA.604-201ENST00000410574 102 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AC017079.2-201ENST00000416102 485 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AC008065.1-201ENST00000428525 348 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 PGBD4P3-201ENST00000440731 581 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 HMGN3P1-201ENST00000453847 193 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 MTCO3P2-201ENST00000457365 171 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 RNA5SP216-201ENST00000516111 123 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 RN7SKP83-201ENST00000516512 178 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AP004247.1-201ENST00000531556 1289 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 HSPE1P3-201ENST00000559254 309 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AL133457.1-201ENST00000564251 987 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 MIR3913-1-201ENST00000577744 102 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 MIR4307-201ENST00000582802 84 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AC123768.4-201ENST00000616244 701 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 OTUD4P1-201ENST00000237841 3067 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 AP002907.1-201ENST00000606361 1430 ntBASIC4.46□□□□□ -1.7
CCNL1Q9UK58 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.46□□□□□ -1.7
CCNL1Q9UK58 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 RNA5SP391-201ENST00000363456 119 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 RN7SKP226-201ENST00000364912 300 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 MIR649-201ENST00000384843 97 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 Y_RNA.582-201ENST00000391023 95 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 RN7SKP111-201ENST00000410349 271 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 RPL37P21-201ENST00000435890 276 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 RSU1P2-202ENST00000437884 485 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 MTATP6P23-201ENST00000440153 476 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 MTND5P14-201ENST00000441481 1267 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 RPL7P31-201ENST00000450192 724 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 RPL31P50-201ENST00000471002 296 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 AC126182.1-201ENST00000478134 357 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 AC023424.2-201ENST00000493479 777 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 RPL30P11-201ENST00000495304 339 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 FCF1P8-201ENST00000510322 597 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 AC091133.4-201ENST00000511142 308 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 AC013828.2-201ENST00000532487 235 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 AP002360.4-201ENST00000606980 481 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 AF250324.2-201ENST00000608299 610 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 AC025588.4-201ENST00000615802 908 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 AC099654.13-201ENST00000639774 207 ntBASIC4.45□□□□□ -1.7
CCNL1Q9UK58 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCNL1Q9UK58 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms