Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 MTND5P29-201ENST00000458676 1807 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 RNU4-91P-201ENST00000364778 135 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 U8.14-201ENST00000390843 143 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 SSXP10-201ENST00000402595 565 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 Y_RNA.619-201ENST00000410951 90 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 RPS27AP14-201ENST00000422868 454 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AC092832.1-201ENST00000422934 400 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AL159987.2-201ENST00000432754 307 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 MUPP-201ENST00000438111 566 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 SNRPEP7-201ENST00000438350 220 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 MTND5P14-201ENST00000441481 1267 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AL592447.1-201ENST00000447592 540 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 SNORD108-201ENST00000459332 71 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AC008155.2-201ENST00000464337 397 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 RPL7L1P8-201ENST00000469911 741 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AC023598.1-201ENST00000472521 361 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AC025881.1-201ENST00000518851 512 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AP002748.2-201ENST00000528671 348 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 MTND1P15-201ENST00000579262 949 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 ZNF415P1-201ENST00000582279 1166 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 MIR7851-201ENST00000610611 160 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AC015967.1-201ENST00000619893 476 ntBASIC3.75□□□□□ -1.81
SIX4Q9UIU6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SIX4Q9UIU6 AP001486.2-201ENST00000561652 5113 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 RPL23AP57-201ENST00000332361 466 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 RNU6-343P-201ENST00000364709 104 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AL024474.1-201ENST00000404655 591 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AC007899.1-201ENST00000412776 775 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 RPL17P12-201ENST00000413391 526 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 TPMTP2-201ENST00000414372 726 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 RPS15AP40-201ENST00000419621 391 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 YME1L1P1-201ENST00000429435 297 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 MRPS18BP2-201ENST00000434310 759 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 GDI2P2-201ENST00000445131 608 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 BX322784.1-201ENST00000455793 1077 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 HMGB1P36-201ENST00000487709 576 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AC090453.1-201ENST00000495560 436 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AP004247.1-201ENST00000531556 1289 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 MIR4738-201ENST00000579134 87 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AC079089.3-201ENST00000603094 673 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AC027807.2-201ENST00000616099 408 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AL357080.1-201ENST00000617394 239 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AC022149.2-201ENST00000621061 203 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms