Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC112653.1-201ENST00000443851 386 ntBASIC3.35□□□□□ -1.87
CTNNA3Q9UI47 CBX3P3-201ENST00000508108 532 ntBASIC3.35□□□□□ -1.87
CTNNA3Q9UI47 AC010468.3-201ENST00000508225 458 ntBASIC3.35□□□□□ -1.87
CTNNA3Q9UI47 HIGD1AP13-201ENST00000509878 289 ntBASIC3.35□□□□□ -1.87
CTNNA3Q9UI47 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.35□□□□□ -1.87
CTNNA3Q9UI47 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.35□□□□□ -1.87
CTNNA3Q9UI47 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.35□□□□□ -1.87
CTNNA3Q9UI47 SNRPGP1-201ENST00000553864 222 ntBASIC3.35□□□□□ -1.87
CTNNA3Q9UI47 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.35□□□□□ -1.87
CTNNA3Q9UI47 ZNF92P2-201ENST00000600543 1059 ntBASIC3.35□□□□□ -1.87
CTNNA3Q9UI47 DUXAP4-201ENST00000603046 613 ntBASIC3.35□□□□□ -1.87
CTNNA3Q9UI47 NUTF2P8-201ENST00000604593 363 ntBASIC3.35□□□□□ -1.87
CTNNA3Q9UI47 AC245100.7-201ENST00000609678 442 ntBASIC3.35□□□□□ -1.87
CTNNA3Q9UI47 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 RNU5D-1-201ENST00000363299 116 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 MIR181A2-201ENST00000384863 110 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 RNA5SP252-201ENST00000391131 119 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 AC000041.1-201ENST00000439655 175 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 AC093156.1-201ENST00000440382 670 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 MTND2P30-201ENST00000456663 382 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 AP001025.2-201ENST00000490908 477 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 OR8K2P-201ENST00000524645 927 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 MIR3605-201ENST00000583214 100 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 SNORD39.3-201ENST00000584451 71 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 ZNF861P-201ENST00000588126 639 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 AC245036.5-201ENST00000596330 847 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 AL020997.3-201ENST00000602843 359 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 AC012669.1-201ENST00000603209 283 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 AC131902.3-201ENST00000611767 581 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 AC010149.2-201ENST00000637608 315 ntBASIC3.34□□□□□ -1.87
CTNNA3Q9UI47 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
CTNNA3Q9UI47 AP003122.5-201ENST00000527668 3766 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 RNA5SP432-201ENST00000362480 116 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 RNU6-792P-201ENST00000363490 107 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 RNU6-173P-201ENST00000364215 104 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 MIR493-201ENST00000385254 89 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AL590762.3-201ENST00000436372 640 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AC002542.1-201ENST00000440683 193 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 RPL23AP16-201ENST00000441715 421 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AL135938.1-201ENST00000443141 297 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 NDUFA5P7-201ENST00000452914 242 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AL590639.1-201ENST00000456484 337 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 NAP1L1P3-201ENST00000462291 880 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 PABPC1P3-201ENST00000469174 459 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 RPL21P47-201ENST00000483696 477 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 RN7SL432P-201ENST00000484057 298 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AC093767.1-201ENST00000504523 156 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 SNORA9.3-201ENST00000516383 129 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 GAS5-AS1-201ENST00000602767 694 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AL359198.2-201ENST00000611836 194 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AL138880.2-201ENST00000616214 239 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AC007275.1-201ENST00000621243 671 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AC106730.3-201ENST00000624568 641 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 HPVC1-201ENST00000629899 1198 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 IGHVIII-44-202ENST00000636235 289 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.33□□□□□ -1.88
CTNNA3Q9UI47 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 AC006378.2-201ENST00000623178 2476 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 SNORA18.3-201ENST00000384122 132 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 RPS15AP38-201ENST00000413110 372 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 AL357078.2-201ENST00000416486 427 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 RPL7P10-201ENST00000417407 739 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 Z93242.1-201ENST00000427102 353 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 AC003982.1-202ENST00000469928 248 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 AC011352.3-201ENST00000505162 593 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 EEF1B2P4-201ENST00000551398 348 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 MED28P6-201ENST00000558776 231 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 GLUD1P4-201ENST00000590914 418 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 NUP58P1-201ENST00000502546 1738 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 AC091564.4-201ENST00000533934 2194 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 AL359693.1-201ENST00000614959 2407 ntBASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CTNNA3Q9UI47 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms