Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SCN11AQ9UI33 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SCN11AQ9UI33 MIR337-201ENST00000362281 93 ntBASIC2.43□□□□□ -2.02
SCN11AQ9UI33 AL358453.1-201ENST00000422522 250 ntBASIC2.43□□□□□ -2.02
SCN11AQ9UI33 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.43□□□□□ -2.02
SCN11AQ9UI33 RNU6-717P-201ENST00000459076 104 ntBASIC2.43□□□□□ -2.02
SCN11AQ9UI33 AC073901.1-201ENST00000462471 408 ntBASIC2.43□□□□□ -2.02
SCN11AQ9UI33 AC079804.2-201ENST00000490376 200 ntBASIC2.43□□□□□ -2.02
SCN11AQ9UI33 AC090543.1-201ENST00000492168 485 ntBASIC2.43□□□□□ -2.02
SCN11AQ9UI33 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.43□□□□□ -2.02
SCN11AQ9UI33 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.43□□□□□ -2.02
SCN11AQ9UI33 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.43□□□□□ -2.02
SCN11AQ9UI33 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.43□□□□□ -2.02
SCN11AQ9UI33 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCN11AQ9UI33 AL627390.1-201ENST00000396055 340 ntBASIC2.42□□□□□ -2.02
SCN11AQ9UI33 BTF3P4-201ENST00000418852 495 ntBASIC2.42□□□□□ -2.02
SCN11AQ9UI33 AL157827.1-201ENST00000447622 132 ntBASIC2.42□□□□□ -2.02
SCN11AQ9UI33 MTCO1P42-201ENST00000457379 726 ntBASIC2.42□□□□□ -2.02
SCN11AQ9UI33 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.42□□□□□ -2.02
SCN11AQ9UI33 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.42□□□□□ -2.02
SCN11AQ9UI33 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.42□□□□□ -2.02
SCN11AQ9UI33 AC034102.8-201ENST00000615146 484 ntBASIC2.42□□□□□ -2.02
SCN11AQ9UI33 AL589994.2-201ENST00000621124 579 ntBASIC2.42□□□□□ -2.02
SCN11AQ9UI33 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SCN11AQ9UI33 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SCN11AQ9UI33 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SCN11AQ9UI33 RNU6-661P-201ENST00000362409 107 ntBASIC2.41□□□□□ -2.02
SCN11AQ9UI33 AP1B1P2-201ENST00000416196 106 ntBASIC2.41□□□□□ -2.02
SCN11AQ9UI33 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.41□□□□□ -2.02
SCN11AQ9UI33 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.41□□□□□ -2.02
SCN11AQ9UI33 HIGD1AP11-201ENST00000438361 280 ntBASIC2.41□□□□□ -2.02
SCN11AQ9UI33 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN11AQ9UI33 RPS7P5-201ENST00000441482 581 ntBASIC2.41□□□□□ -2.02
SCN11AQ9UI33 ARL4AP2-201ENST00000507378 601 ntBASIC2.41□□□□□ -2.02
SCN11AQ9UI33 AC239860.2-201ENST00000525886 270 ntBASIC2.41□□□□□ -2.02
SCN11AQ9UI33 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN11AQ9UI33 DNAJC19P9-201ENST00000555084 351 ntBASIC2.41□□□□□ -2.02
SCN11AQ9UI33 RPS3AP23-202ENST00000574601 686 ntBASIC2.41□□□□□ -2.02
SCN11AQ9UI33 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SCN11AQ9UI33 SNORA31-201ENST00000362607 130 ntBASIC2.41□□□□□ -2.02
SCN11AQ9UI33 MIR1294-201ENST00000408503 142 ntBASIC2.41□□□□□ -2.02
SCN11AQ9UI33 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SCN11AQ9UI33 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.41□□□□□ -2.02
SCN11AQ9UI33 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.41□□□□□ -2.02
SCN11AQ9UI33 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SCN11AQ9UI33 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SCN11AQ9UI33 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.41□□□□□ -2.02
SCN11AQ9UI33 MIR4303-201ENST00000581299 66 ntBASIC2.41□□□□□ -2.02
SCN11AQ9UI33 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.41□□□□□ -2.02
SCN11AQ9UI33 AC103988.1-201ENST00000566382 2177 ntBASIC2.4□□□□□ -2.02
SCN11AQ9UI33 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.4□□□□□ -2.03
SCN11AQ9UI33 AC026241.1-201ENST00000517873 2142 ntBASIC2.4□□□□□ -2.03
SCN11AQ9UI33 MTND4P13-201ENST00000402078 1023 ntBASIC2.4□□□□□ -2.03
SCN11AQ9UI33 RPL19P1-201ENST00000411635 428 ntBASIC2.4□□□□□ -2.03
SCN11AQ9UI33 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN11AQ9UI33 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN11AQ9UI33 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.4□□□□□ -2.03
SCN11AQ9UI33 AC009237.8-201ENST00000445492 379 ntBASIC2.4□□□□□ -2.03
SCN11AQ9UI33 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.4□□□□□ -2.03
SCN11AQ9UI33 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.4□□□□□ -2.03
SCN11AQ9UI33 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.4□□□□□ -2.03
SCN11AQ9UI33 RNU6-56P-201ENST00000516986 93 ntBASIC2.4□□□□□ -2.03
SCN11AQ9UI33 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.4□□□□□ -2.03
SCN11AQ9UI33 AC126177.3-201ENST00000551839 688 ntBASIC2.4□□□□□ -2.03
SCN11AQ9UI33 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.4□□□□□ -2.03
SCN11AQ9UI33 AC011890.2-201ENST00000613393 294 ntBASIC2.4□□□□□ -2.03
SCN11AQ9UI33 OR1S1-201ENST00000624470 978 ntBASIC2.4□□□□□ -2.03
SCN11AQ9UI33 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.39□□□□□ -2.03
SCN11AQ9UI33 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SCN11AQ9UI33 MIRLET7G-201ENST00000362280 84 ntBASIC2.39□□□□□ -2.03
SCN11AQ9UI33 Y_RNA.122-201ENST00000363331 96 ntBASIC2.39□□□□□ -2.03
SCN11AQ9UI33 EIF1AXP1-201ENST00000419267 435 ntBASIC2.39□□□□□ -2.03
SCN11AQ9UI33 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN11AQ9UI33 AC025033.1-201ENST00000463883 194 ntBASIC2.39□□□□□ -2.03
SCN11AQ9UI33 RNA5SP480-201ENST00000516840 109 ntBASIC2.39□□□□□ -2.03
SCN11AQ9UI33 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN11AQ9UI33 MIR3683-201ENST00000580847 82 ntBASIC2.39□□□□□ -2.03
SCN11AQ9UI33 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN11AQ9UI33 AC027514.1-201ENST00000588561 1603 ntBASIC2.39□□□□□ -2.03
SCN11AQ9UI33 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
SCN11AQ9UI33 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SCN11AQ9UI33 RNA5SP190-201ENST00000365222 118 ntBASIC2.38□□□□□ -2.03
SCN11AQ9UI33 RPL23AP63-201ENST00000498752 471 ntBASIC2.38□□□□□ -2.03
SCN11AQ9UI33 HAUS1P1-201ENST00000505275 832 ntBASIC2.38□□□□□ -2.03
SCN11AQ9UI33 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.38□□□□□ -2.03
SCN11AQ9UI33 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.38□□□□□ -2.03
SCN11AQ9UI33 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SCN11AQ9UI33 SUB1P3-201ENST00000564581 315 ntBASIC2.38□□□□□ -2.03
SCN11AQ9UI33 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.38□□□□□ -2.03
SCN11AQ9UI33 AC092954.1-201ENST00000609121 445 ntBASIC2.38□□□□□ -2.03
SCN11AQ9UI33 AC091046.2-201ENST00000620775 665 ntBASIC2.38□□□□□ -2.03
SCN11AQ9UI33 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN11AQ9UI33 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN11AQ9UI33 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SCN11AQ9UI33 AL139811.1-201ENST00000424779 2299 ntBASIC2.38□□□□□ -2.03
SCN11AQ9UI33 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.38□□□□□ -2.03
SCN11AQ9UI33 AC005336.3-201ENST00000623833 2679 ntBASIC2.38□□□□□ -2.03
SCN11AQ9UI33 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN11AQ9UI33 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SCN11AQ9UI33 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms