Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 AC006466.1-201ENST00000438721 289 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 AC140076.1-201ENST00000449897 361 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
DDX56Q9NY93 AL513533.1-201ENST00000453728 415 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 DHFRP3-201ENST00000455595 559 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 RN7SL432P-201ENST00000484057 298 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 RPS27AP13-201ENST00000498403 237 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 AC138853.1-201ENST00000503549 823 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 AC124947.2-202ENST00000552735 133 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 AC084783.1-201ENST00000565846 910 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 AL161729.4-201ENST00000604650 476 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 AL161616.1-201ENST00000611867 286 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 AC015540.1-201ENST00000615828 501 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 AC084035.1-201ENST00000634543 607 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 OR4G2P-202ENST00000641004 1759 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DDX56Q9NY93 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DDX56Q9NY93 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
DDX56Q9NY93 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
DDX56Q9NY93 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX56Q9NY93 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 EXOC5P1-201ENST00000510543 1969 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 MIR493-201ENST00000385254 89 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 SNORD66.1-201ENST00000391230 76 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX56Q9NY93 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
DDX56Q9NY93 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX56Q9NY93 RN7SKP140-201ENST00000411196 284 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 AL513331.1-201ENST00000411908 397 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 MTND3P17-201ENST00000416968 344 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 RAC1P6-201ENST00000423911 575 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 RPL31P35-201ENST00000431058 377 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 AL121877.1-201ENST00000453704 622 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 MTCO3P20-201ENST00000454926 688 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 CEACAMP4-201ENST00000457676 421 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 TPT1P7-201ENST00000458300 517 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 AC010469.1-201ENST00000463864 576 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 RPL35AP15-201ENST00000468042 339 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 RN7SL354P-201ENST00000469282 294 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 RPS3AP17-201ENST00000472594 777 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 RPL31P60-201ENST00000478450 367 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 AC090281.1-201ENST00000523019 276 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 AC022880.1-201ENST00000534017 973 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 AC078795.2-201ENST00000602835 1252 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 AL031666.3-201ENST00000609320 1006 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 AL021997.2-201ENST00000615674 271 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 AC099842.1-201ENST00000619919 596 ntBASIC4.53□□□□□ -1.68
DDX56Q9NY93 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX56Q9NY93 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX56Q9NY93 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX56Q9NY93 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
DDX56Q9NY93 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX56Q9NY93 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
DDX56Q9NY93 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 RAD17P1-201ENST00000418130 2042 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
DDX56Q9NY93 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
DDX56Q9NY93 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 RNA5SP175-201ENST00000364275 119 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 AL591034.1-201ENST00000407447 340 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 AL161631.1-201ENST00000417933 486 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 YPEL5P1-201ENST00000419731 367 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms