Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 MTCO2P31-201ENST00000402702 684 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 RNU6-575P-201ENST00000411326 105 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 SFR1P2-201ENST00000421841 730 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC092047.1-201ENST00000424997 240 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 RPL35AP22-201ENST00000436855 335 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 SDCBPP1-201ENST00000440192 890 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC044797.1-201ENST00000445744 679 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 RNU7-140P-201ENST00000459546 60 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC010326.1-201ENST00000462726 602 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 MTND4LP3-201ENST00000468320 276 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 PRELID3BP6-201ENST00000503839 571 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC118282.2-201ENST00000508739 374 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC093853.1-201ENST00000515689 483 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 RN7SKP31-201ENST00000516354 278 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 SCARNA15.2-201ENST00000516409 127 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AP003467.2-201ENST00000520175 319 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AP005902.1-201ENST00000521358 186 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AP001317.1-201ENST00000531194 960 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC078814.3-201ENST00000553036 491 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 MTCYBP27-201ENST00000555160 670 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AGGF1P6-201ENST00000569213 976 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 MRPL45P2-203ENST00000573318 473 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 OR4K7P-201ENST00000580232 945 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AL022067.1-201ENST00000602426 454 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC012493.3-201ENST00000604494 112 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AL031176.1-201ENST00000604554 466 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AL450336.1-201ENST00000605180 586 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 RNU1-30P-201ENST00000606575 163 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AL627230.6-201ENST00000611129 280 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC005344.1-201ENST00000613391 459 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AL445493.3-201ENST00000619568 477 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 MIR6806-201ENST00000622141 64 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 FP236240.3-201ENST00000623061 327 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC026634.1-201ENST00000634369 198 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC127502.3-201ENST00000636170 1206 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AL355596.1-201ENST00000565399 3996 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 DDX10P1-201ENST00000448545 1933 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC080128.1-201ENST00000474389 1917 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC007785.2-201ENST00000598627 1916 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC073325.2-201ENST00000339545 159 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 SNORA62.3-201ENST00000365110 153 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 RNU6-217P-201ENST00000384164 104 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 SNORA36C-201ENST00000384289 132 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 MIR217-201ENST00000384817 110 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 MIR514A1-201ENST00000385133 98 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AL162578.1-201ENST00000406202 378 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AL592310.1-201ENST00000414330 671 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AL158050.1-201ENST00000416077 457 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AL591419.1-201ENST00000427423 339 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 RPS29P17-201ENST00000430795 166 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 ATP5F1P1-201ENST00000433775 569 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms