Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SNORA20.2-201ENST00000383922 131 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 Y_RNA.573-201ENST00000384763 105 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 RNU6-754P-201ENST00000391166 107 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.71□□□□□ -1.66
VTA1Q9NP79 AL590002.1-201ENST00000406554 418 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 CYCSP19-201ENST00000411715 316 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.71□□□□□ -1.66
VTA1Q9NP79 AC099677.1-201ENST00000420575 175 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 RBMY1KP-201ENST00000423480 476 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 MTCO2P11-201ENST00000431069 680 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.71□□□□□ -1.66
VTA1Q9NP79 AC104850.1-201ENST00000435940 476 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.71□□□□□ -1.66
VTA1Q9NP79 RAC1P7-201ENST00000445367 377 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 AC022364.2-201ENST00000457963 554 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 RPL38P1-201ENST00000460914 211 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VTA1Q9NP79 AC079382.1-201ENST00000493346 557 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 RPL7P23-201ENST00000493874 747 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 AC019235.1-201ENST00000503847 207 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 AC017037.2-201ENST00000513850 890 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 SNORA67.7-201ENST00000516664 135 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.71□□□□□ -1.66
VTA1Q9NP79 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.71□□□□□ -1.66
VTA1Q9NP79 AL157687.1-201ENST00000554853 619 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
VTA1Q9NP79 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.71□□□□□ -1.66
VTA1Q9NP79 MIR3158-1-201ENST00000583596 81 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.71□□□□□ -1.66
VTA1Q9NP79 AC007038.2-201ENST00000608095 740 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 AC006133.1-201ENST00000617106 264 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 AL732618.1-201ENST00000623251 301 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 AC067931.1-201ENST00000624190 671 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 MIR4275-201ENST00000636486 87 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.71□□□□□ -1.66
VTA1Q9NP79 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VTA1Q9NP79 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VTA1Q9NP79 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VTA1Q9NP79 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VTA1Q9NP79 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.71□□□□□ -1.66
VTA1Q9NP79 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC007390.2-201ENST00000606229 3803 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 EOGT-210ENST00000615922 1931 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC018529.3-201ENST00000624212 2254 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC116667.1-201ENST00000604855 2072 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 RNU6-181P-201ENST00000363225 107 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 MIR19A-201ENST00000384878 82 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 CCNG1P1-201ENST00000406783 885 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 RNU6-195P-201ENST00000411352 109 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 AL451074.3-201ENST00000437709 472 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 RPS29P7-201ENST00000439662 171 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC013267.1-201ENST00000458227 267 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 MTCO3P38-201ENST00000468910 766 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 RPL31P58-201ENST00000469001 379 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 RNU6-445P-201ENST00000516949 107 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 RNU1-45P-201ENST00000517191 141 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 AL133241.1-201ENST00000556832 487 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 HMGB1P33-201ENST00000563485 527 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC068790.5-201ENST00000602741 355 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC012507.3-201ENST00000603556 477 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC008277.2-201ENST00000605196 797 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VTA1Q9NP79 MIR6130-201ENST00000619419 109 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC019278.1-201ENST00000623516 479 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC005609.4-201ENST00000625071 447 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 AL157786.1-207ENST00000627771 695 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VTA1Q9NP79 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 AL136964.1-201ENST00000622038 2990 ntBASIC4.7□□□□□ -1.66
VTA1Q9NP79 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.7□□□□□ -1.66
VTA1Q9NP79 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VTA1Q9NP79 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 RNY4P14-201ENST00000363656 96 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 RNU4-12P-201ENST00000365233 139 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 RNA5SP22-201ENST00000365393 109 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 RNU6-108P-201ENST00000365558 107 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.69□□□□□ -1.66
VTA1Q9NP79 Y_RNA.554-201ENST00000384672 102 ntBASIC4.69□□□□□ -1.66
VTA1Q9NP79 LAP3P1-201ENST00000403648 294 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms