Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 CR383656.7-201ENST00000548164 174 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC090616.3-201ENST00000582184 217 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AP002906.1-201ENST00000603405 233 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AL671309.1-201ENST00000603750 544 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC092954.1-201ENST00000609121 445 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC020658.4-201ENST00000613987 684 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AL445493.3-201ENST00000619568 477 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC097460.3-201ENST00000623099 442 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC090772.4-201ENST00000623599 362 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC068880.5-201ENST00000624331 290 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC026634.1-201ENST00000634369 198 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 OR4G11P-202ENST00000642116 1414 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 DEFB108F-201ENST00000344638 222 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 MIR217-201ENST00000384817 110 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 TMSB4XP8-201ENST00000402089 135 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 TMSB4XP6-201ENST00000415187 135 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 TMSB4XP1-201ENST00000424567 135 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 ARL4AP4-201ENST00000434170 518 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 COX6CP18-201ENST00000448769 222 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 NIPA2P5-201ENST00000452282 464 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 RPL7P15-201ENST00000461190 712 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 AC113420.1-201ENST00000507903 571 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 DEFB108D-201ENST00000527787 222 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 ZNF971P-201ENST00000562068 1249 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 AC010546.1-201ENST00000569391 485 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 ISCA1P3-201ENST00000577104 373 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 AC105224.1-201ENST00000587055 421 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 AC093227.2-201ENST00000589357 285 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 AC119501.1-201ENST00000603646 475 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 AC245389.1-201ENST00000605141 529 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 MIR8084-201ENST00000614105 89 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 HPVC1-201ENST00000629899 1198 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 ZNF285B-201ENST00000561698 1767 ntBASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
VCX3AQ9NNX9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 RNU6-851P-201ENST00000384565 107 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 RNU6-878P-201ENST00000384578 110 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 MIR627-201ENST00000384979 97 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 RNA5SP210-201ENST00000391034 120 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AL035405.1-201ENST00000400795 710 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 RNU2-28P-201ENST00000410457 189 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 RPL26P29-201ENST00000415623 438 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 MTCO3P1-205ENST00000422088 832 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AL365496.1-201ENST00000426885 215 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 Z93242.1-201ENST00000427102 353 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 BRWD1P3-201ENST00000428816 390 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AC090774.1-201ENST00000435925 246 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AL671855.1-201ENST00000446875 1203 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AL592447.1-201ENST00000447592 540 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 RN7SL293P-201ENST00000481765 281 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AC013828.1-201ENST00000481845 158 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 RPL30P5-201ENST00000494923 336 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AL359273.1-201ENST00000510918 627 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AC006518.2-201ENST00000542513 940 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AC084824.1-201ENST00000550917 1005 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AL031176.1-201ENST00000604554 466 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 AC012467.1-201ENST00000607740 256 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 MIR3651-201ENST00000630427 90 ntBASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VCX3AQ9NNX9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 TPTE2P4-201ENST00000258589 1605 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms