Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 MTND5P7-201ENST00000413558 1798 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 RNU6-353P-201ENST00000364266 108 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 U6.112-201ENST00000384129 70 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 SNORD15B-201ENST00000384714 146 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC016769.3-201ENST00000396562 315 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 RN7SKP220-201ENST00000410611 288 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 RN7SKP123-201ENST00000410732 291 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 RPL7P10-201ENST00000417407 739 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 RPL7P30-201ENST00000420888 709 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 NDUFB4P6-201ENST00000436819 366 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 Z82190.1-201ENST00000454534 490 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC104164.3-201ENST00000467363 1258 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC091860.1-201ENST00000505723 432 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC118282.1-201ENST00000506408 765 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC009901.1-201ENST00000506703 541 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AP000867.2-201ENST00000532468 320 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC027807.1-201ENST00000559921 996 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AL031176.1-201ENST00000604554 466 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AP003973.1-201ENST00000604639 691 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC097504.2-201ENST00000608088 454 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 MTND5P19-201ENST00000424872 1794 ntBASIC3.1□□□□□ -1.91
TM9SF3Q9HD45 AC008568.2-201ENST00000623862 2313 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AC000403.1-201ENST00000613696 3585 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 TAB3P1-202ENST00000452645 1634 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 U3.6-201ENST00000363622 211 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 ARF4P3-201ENST00000397387 509 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AL136133.1-201ENST00000413694 376 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 Z96811.1-201ENST00000445880 108 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AC016696.1-201ENST00000446949 318 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 SNRPGP6-201ENST00000451124 220 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 BOLA3P3-201ENST00000505182 232 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AL359273.1-201ENST00000510918 627 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 MTCO3P27-201ENST00000514397 196 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 RNU6-467P-201ENST00000517027 110 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AP001207.2-201ENST00000519490 539 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AC092451.2-201ENST00000538746 658 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 NBEAP1-201ENST00000554452 979 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AP001542.2-201ENST00000593141 364 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AC013444.2-201ENST00000603317 787 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AC078880.5-201ENST00000617845 421 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AC007998.5-201ENST00000622938 237 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AC002064.3-201ENST00000623448 346 ntBASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TM9SF3Q9HD45 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
TM9SF3Q9HD45 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 DEFB108F-201ENST00000344638 222 ntBASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 RNU6-882P-201ENST00000391025 103 ntBASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 UBE2V1P2-201ENST00000397758 440 ntBASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 MIR1290-201ENST00000408735 78 ntBASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 AL645937.1-202ENST00000421799 937 ntBASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 HMGN2P30-201ENST00000423237 256 ntBASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.08□□□□□ -1.92
TM9SF3Q9HD45 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms