Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 NF1P10-201ENST00000613227 742 ntBASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 AC011890.2-201ENST00000613393 294 ntBASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.09
KIAA1549Q9HCM3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
KIAA1549Q9HCM3 RNU6-1293P-201ENST00000384077 107 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 RPL19P1-201ENST00000411635 428 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 RPL23AP39-201ENST00000415533 405 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 AL513477.1-202ENST00000417061 214 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 RPL17P49-201ENST00000443728 411 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 TRBV26-201ENST00000456572 344 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 MTND4P2-201ENST00000507767 1203 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 RNA5SP200-201ENST00000516360 103 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 RNU6-156P-201ENST00000621869 107 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 MIR7843-201ENST00000622274 79 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 MIR504-201ENST00000385065 83 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 MIR221-201ENST00000385135 110 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 MTATP6P4-201ENST00000427725 675 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 AL627224.1-201ENST00000448334 444 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 SSXP4-201ENST00000451349 245 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 AC068587.2-201ENST00000478386 781 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 AP004371.1-201ENST00000525240 214 ntBASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.96□□□□□ -2.1
KIAA1549Q9HCM3 MAPK10-266ENST00000641066 6555 ntBASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 RNU1-109P-201ENST00000383960 147 ntBASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 UBE2V1P5-201ENST00000440070 405 ntBASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 ELOCP13-201ENST00000443934 329 ntBASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 AL445669.2-201ENST00000454425 421 ntBASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 RPL7L1P13-201ENST00000511702 739 ntBASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 TBCAP3-201ENST00000512475 312 ntBASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 AC087373.1-201ENST00000524920 491 ntBASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 AL163153.1-201ENST00000554223 283 ntBASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 AC008687.2-201ENST00000597865 520 ntBASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 AC008962.1-201ENST00000605729 304 ntBASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KIAA1549Q9HCM3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 DEFB109C-201ENST00000382575 264 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 DEFB109B-201ENST00000382656 264 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 HSPE1P1-201ENST00000421494 318 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 ATP5F1P1-201ENST00000433775 569 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AC098826.1-201ENST00000433943 471 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 CBWD4P-201ENST00000445695 655 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 RPS24P6-201ENST00000452670 400 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AC027673.1-201ENST00000456245 405 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 HMGN2P13-201ENST00000476476 274 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AC004062.1-201ENST00000509926 645 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AC008837.1-201ENST00000511513 412 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 TTC39CP1-201ENST00000512513 755 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 OR10V3P-201ENST00000525712 725 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 OR5BN1P-201ENST00000532955 829 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 NTAN1P1-201ENST00000603150 646 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AC025811.1-201ENST00000604312 472 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AC135803.1-201ENST00000608748 565 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AC093591.3-201ENST00000634516 308 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 MTND5P28-201ENST00000438005 1594 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 OR56A5-201ENST00000340110 738 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 RNA5SP391-201ENST00000363456 119 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 BTBD10P2-201ENST00000404779 676 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 SSXP9-201ENST00000417503 292 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms