Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 RPS15AP1-201ENST00000457423 391 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 RPL7P49-201ENST00000471402 708 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AC079382.1-201ENST00000493346 557 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 MTCYBP18-201ENST00000501056 747 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 MTCO2P30-201ENST00000503662 364 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 PTGES3P3-201ENST00000511479 482 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AC025465.4-201ENST00000513422 638 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AC010342.1-201ENST00000514047 877 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AC239860.2-201ENST00000525886 270 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AC091489.2-201ENST00000566263 604 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AC136618.2-201ENST00000575091 400 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AP001004.1-201ENST00000582468 324 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AC044792.1-201ENST00000593294 196 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 VN1R79P-201ENST00000593540 513 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AC008687.2-201ENST00000597865 520 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AL161729.4-201ENST00000604650 476 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AL034408.1-202ENST00000636088 415 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 ZNF680P1-201ENST00000436625 1469 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 ZNF37BP-203ENST00000452306 1352 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 MIR423-201ENST00000362201 94 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 Y_RNA.9-201ENST00000362354 101 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 RNA5SP119-201ENST00000362715 117 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 RNY4P14-201ENST00000363656 96 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 Y_RNA.333-201ENST00000365274 102 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 SNORA5A-201ENST00000384111 134 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 Y_RNA.509-201ENST00000384506 99 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 RNU6-146P-201ENST00000384602 108 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 MIR7-3-201ENST00000384898 110 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 RNU6-876P-201ENST00000391295 104 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AL138878.1-201ENST00000405131 347 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 Z98941.1-201ENST00000407764 100 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 CYP4F29P-201ENST00000420685 446 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC012498.1-201ENST00000424037 437 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC009965.2-201ENST00000425328 970 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC007742.1-201ENST00000425789 329 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC073464.1-201ENST00000429823 534 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 MTND4LP10-201ENST00000435146 291 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 ELOCP26-201ENST00000436067 329 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 PSPHP1-201ENST00000450062 261 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 HMGN3P1-201ENST00000453847 193 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 LARP1BP2-201ENST00000486594 519 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 RNU6-583P-201ENST00000516012 92 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 RNU6-1153P-201ENST00000516760 105 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 SCARNA14-201ENST00000516903 136 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC026403.1-201ENST00000518938 295 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 DEFB109D-201ENST00000529497 240 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 OR4A45P-201ENST00000529954 901 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AL138976.2-201ENST00000563989 694 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 DUXAP4-201ENST00000603046 613 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AL049634.3-201ENST00000604968 457 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 RNU6-88P-201ENST00000606801 100 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC128687.2-201ENST00000609657 566 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC123768.4-201ENST00000616244 701 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AL139089.1-201ENST00000620372 975 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC079228.1-201ENST00000624774 1049 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 AC024560.2-201ENST00000507981 1497 ntBASIC4.03□□□□□ -1.76
EBF3Q9H4W6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
EBF3Q9H4W6 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms