Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AC022868.1-201ENST00000517767 391 ntBASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 MRPS21P7-201ENST00000566937 238 ntBASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
NUCKS1Q9H1E3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
NUCKS1Q9H1E3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
NUCKS1Q9H1E3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 AC134882.1-201ENST00000603738 1676 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 Y_RNA.64-201ENST00000362845 102 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 Y_RNA.126-201ENST00000363382 111 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 RNU6-188P-201ENST00000364207 107 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 RNU6-806P-201ENST00000365147 105 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 RNU6-225P-201ENST00000384613 103 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 SNORA41-201ENST00000384675 132 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 RNU6-95P-201ENST00000384697 107 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 MIR323B-201ENST00000385269 82 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 RPL30P2-201ENST00000414021 291 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 AL133173.1-201ENST00000423458 397 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 AP001992.1-205ENST00000462248 379 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 RPL21P8-201ENST00000465083 535 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 AC092754.1-201ENST00000472975 479 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 DEFB109F-201ENST00000491870 277 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 CEACAMP10-202ENST00000495431 496 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 MTCO3P44-201ENST00000510977 541 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 RNU6-1069P-201ENST00000516612 133 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 AL049779.2-201ENST00000553847 315 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 MIR1273E-201ENST00000581165 102 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 RN7SL753P-201ENST00000581238 290 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 MIR3941-201ENST00000582572 103 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 AC005899.2-201ENST00000584353 90 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 PRPF19P1-201ENST00000584766 898 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 AC012616.1-201ENST00000600294 197 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 AL691477.1-201ENST00000624398 162 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 AL353662.3-201ENST00000625131 237 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 AL049767.1-202ENST00000637826 242 ntBASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUCKS1Q9H1E3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 Y_RNA.270-201ENST00000364693 104 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 RNU6-662P-201ENST00000384253 104 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 RPL21P67-201ENST00000402896 478 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AC096664.2-201ENST00000411843 406 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AC079355.1-201ENST00000421770 223 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 MRPS18BP2-201ENST00000434310 759 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AL390119.1-201ENST00000440329 312 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 CEACAMP9-201ENST00000442990 513 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AC108860.1-201ENST00000484521 383 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 RN7SL466P-201ENST00000497546 295 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AC093853.1-201ENST00000515689 483 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms