Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 NIFKP8-201ENST00000560500 874 ntBASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 AL157394.1-201ENST00000562983 1224 ntBASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 AL138478.1-201ENST00000612252 832 ntBASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 MIR7106-201ENST00000612419 65 ntBASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 U6.48-201ENST00000618523 106 ntBASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 AC010975.3-201ENST00000618727 978 ntBASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 Z99129.2-201ENST00000619967 314 ntBASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 AC097520.1-201ENST00000624435 385 ntBASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 AL109659.3-201ENST00000624985 950 ntBASIC2.59□□□□□ -1.99
RSPO3Q9BXY4 AC109315.1-201ENST00000584143 1347 ntBASIC2.59□□□□□ -2
RSPO3Q9BXY4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.59□□□□□ -2
RSPO3Q9BXY4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.59□□□□□ -2
RSPO3Q9BXY4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.59□□□□□ -2
RSPO3Q9BXY4 AL049737.1-201ENST00000413920 1403 ntBASIC2.59□□□□□ -2
RSPO3Q9BXY4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.58□□□□□ -2
RSPO3Q9BXY4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.58□□□□□ -2
RSPO3Q9BXY4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.58□□□□□ -2
RSPO3Q9BXY4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
RSPO3Q9BXY4 NACA3P-201ENST00000359690 648 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 RNU4-51P-201ENST00000364206 140 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 SNORA9.2-201ENST00000365361 133 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 OR1L1-202ENST00000373686 1083 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
RSPO3Q9BXY4 RNU6-224P-201ENST00000384055 107 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 RNU6-549P-201ENST00000384433 107 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 MIR887-201ENST00000401258 79 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 RNA5SP129-201ENST00000410276 118 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 RNU6-1077P-201ENST00000410506 102 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 RNU6-77P-201ENST00000410554 91 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AL009174.1-201ENST00000426577 416 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC093151.1-201ENST00000427711 313 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 OR51AB1P-201ENST00000429046 620 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 USP9YP24-201ENST00000434374 697 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC112220.1-201ENST00000434628 355 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC234064.1-201ENST00000436312 247 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.58□□□□□ -2
RSPO3Q9BXY4 USP9YP17-201ENST00000444617 696 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 ZNF886P-201ENST00000450781 723 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 NIPA2P5-201ENST00000452282 464 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC092155.2-201ENST00000454675 477 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AL024509.2-201ENST00000493462 493 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 ARL4AP2-201ENST00000507378 601 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 KLHL2P1-201ENST00000508691 521 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC104108.1-201ENST00000509930 412 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC008494.2-201ENST00000514544 370 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 snoZ278.1-201ENST00000517059 112 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC026407.1-201ENST00000518369 204 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 IGJP1-201ENST00000522682 475 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 EEF1A1P37-201ENST00000522748 715 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 FAM60DP-201ENST00000524174 632 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 MTND2P26-201ENST00000528255 1029 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC007536.1-201ENST00000533382 349 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.58□□□□□ -2
RSPO3Q9BXY4 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC074029.1-201ENST00000552531 1044 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 MTND3P13-201ENST00000574391 343 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.58□□□□□ -2
RSPO3Q9BXY4 AL035411.2-201ENST00000604022 421 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 Z99289.3-201ENST00000605586 594 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AL583856.2-201ENST00000606298 543 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC087683.2-201ENST00000611384 326 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC009159.2-201ENST00000617603 606 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC006386.2-201ENST00000624491 75 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC012005.1-201ENST00000624575 75 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 ZNF807-201ENST00000328088 1707 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
RSPO3Q9BXY4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.58□□□□□ -2
RSPO3Q9BXY4 AC096644.4-201ENST00000563417 2912 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RSPO3Q9BXY4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.58□□□□□ -2
RSPO3Q9BXY4 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.58□□□□□ -2
RSPO3Q9BXY4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RSPO3Q9BXY4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.57□□□□□ -2
RSPO3Q9BXY4 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
RSPO3Q9BXY4 ANKRD36P1-201ENST00000344424 659 ntBASIC2.57□□□□□ -2
RSPO3Q9BXY4 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.57□□□□□ -2
RSPO3Q9BXY4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RSPO3Q9BXY4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.57□□□□□ -2
RSPO3Q9BXY4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.57□□□□□ -2
RSPO3Q9BXY4 MIR513B-201ENST00000385136 84 ntBASIC2.57□□□□□ -2
RSPO3Q9BXY4 Y_RNA.578-201ENST00000390903 88 ntBASIC2.57□□□□□ -2
RSPO3Q9BXY4 AL591034.1-201ENST00000407447 340 ntBASIC2.57□□□□□ -2
RSPO3Q9BXY4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.57□□□□□ -2
RSPO3Q9BXY4 VPS26BP1-201ENST00000417155 755 ntBASIC2.57□□□□□ -2
RSPO3Q9BXY4 AL356320.2-201ENST00000417263 507 ntBASIC2.57□□□□□ -2
RSPO3Q9BXY4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.57□□□□□ -2
RSPO3Q9BXY4 RPS3AP37-201ENST00000419176 745 ntBASIC2.57□□□□□ -2
RSPO3Q9BXY4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.57□□□□□ -2
RSPO3Q9BXY4 AL513175.2-201ENST00000422071 443 ntBASIC2.57□□□□□ -2
RSPO3Q9BXY4 RAC1P8-201ENST00000427086 527 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms