Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 RNA5SP372-201ENST00000390836 115 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AL590762.2-201ENST00000395798 571 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AL024474.1-201ENST00000404655 591 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 Y_RNA.597-201ENST00000410463 100 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC017078.1-201ENST00000416146 368 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 RPS12P5-201ENST00000423449 371 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC093106.2-201ENST00000428212 385 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 TRBV26-201ENST00000456572 344 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC010326.1-201ENST00000462726 602 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 RN7SL352P-201ENST00000466002 277 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC109327.1-201ENST00000471666 403 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 RPL23AP40-201ENST00000487630 390 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 NDUFB4P9-201ENST00000511646 388 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC074133.1-201ENST00000515696 183 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC023632.4-201ENST00000517783 191 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AP001781.1-201ENST00000530977 207 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 MIR3939-201ENST00000582614 106 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC018809.2-201ENST00000602436 3823 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 ELOCP5-201ENST00000604924 333 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AL160281.1-201ENST00000605307 311 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC108706.1-201ENST00000611053 297 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC000123.2-201ENST00000623124 461 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC091895.1-201ENST00000624494 256 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 MAPK10-365ENST00000641902 3825 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 MROH3P-201ENST00000435735 2676 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AL445437.1-201ENST00000623157 3087 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 Y_RNA.233-201ENST00000364407 101 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 Y_RNA.581-201ENST00000391017 97 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 ELOCP19-201ENST00000411919 318 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 AC017079.2-201ENST00000416102 485 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 CYP4F30P-202ENST00000420048 405 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 AL358176.3-201ENST00000420757 454 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 ELOCP18-201ENST00000434209 337 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 PRDX3P3-201ENST00000447765 522 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 SNORD97-201ENST00000459187 142 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 AC087190.1-201ENST00000484462 480 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 AC107032.1-201ENST00000485945 480 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 RPL23AP55-201ENST00000498163 452 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 AC093840.1-201ENST00000511599 336 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 AL133153.1-201ENST00000557756 303 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 AC107081.3-201ENST00000612715 2034 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 TNPO1P2-201ENST00000426249 2665 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 AL109809.4-201ENST00000603520 2185 ntBASIC5.56□□□□□ -1.52
COL25A1Q9BXS0 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 LINC02555-201ENST00000563933 1951 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 SNORA62.3-201ENST00000365110 153 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms