Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 AC098799.1-201ENST00000504752 800 ntBASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 MTCO1P47-201ENST00000523889 1271 ntBASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 LSM6P2-201ENST00000552208 177 ntBASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 CKS1BP1-201ENST00000555221 240 ntBASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 MIR4635-201ENST00000583759 79 ntBASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 ELOCP29-201ENST00000588193 334 ntBASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 VN1R7P-201ENST00000619242 903 ntBASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 AC068880.5-201ENST00000624331 290 ntBASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 AL121594.5-201ENST00000631724 573 ntBASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 AC010680.1-201ENST00000590024 3590 ntBASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CDCA4Q9BXL8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 SNORA80A-201ENST00000363922 136 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 RNU6-1005P-201ENST00000384519 107 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 MIR627-201ENST00000384979 97 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AL136372.1-201ENST00000403060 228 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 EEF1A1P41-201ENST00000414667 207 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 RPLP0P7-201ENST00000416050 667 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 RPL27AP8-201ENST00000424277 446 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 TRBV26-201ENST00000456572 344 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AC092798.1-201ENST00000458542 409 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AC133134.1-201ENST00000466800 359 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AC096576.1-201ENST00000489014 359 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 RPPH1-2P-201ENST00000516688 293 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 RN7SKP40-201ENST00000517211 242 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AC100870.1-201ENST00000522035 505 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 MIR3609-201ENST00000582661 80 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AC008739.2-201ENST00000597006 317 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 DUXAP3-201ENST00000603616 594 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 MIR7106-201ENST00000612419 65 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AL162233.1-201ENST00000620014 944 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AC040168.1-201ENST00000623594 991 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AC104820.1-201ENST00000624183 307 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AC110079.1-202ENST00000635213 138 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 MFSD8-245ENST00000641743 948 ntBASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDCA4Q9BXL8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 FRG1BP-201ENST00000278882 761 ntBASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 U8.8-201ENST00000365399 135 ntBASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 AL356057.2-201ENST00000403318 432 ntBASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 AL356320.2-201ENST00000417263 507 ntBASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 NDUFB4P6-201ENST00000436819 366 ntBASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 AC010099.1-201ENST00000455434 375 ntBASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 RPS29P26-201ENST00000477483 171 ntBASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 CBX3P3-201ENST00000508108 532 ntBASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 AC006445.2-201ENST00000510061 472 ntBASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 EEF1B2P4-201ENST00000551398 348 ntBASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 AC138761.3-201ENST00000579993 334 ntBASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 AC010738.1-201ENST00000604970 987 ntBASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 AC024560.3-201ENST00000608482 349 ntBASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 AP004247.3-201ENST00000608682 624 ntBASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDCA4Q9BXL8 MTND5P11-201ENST00000511037 1812 ntBASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 TAB3P1-202ENST00000452645 1634 ntBASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 AL672167.1-206ENST00000356293 943 ntBASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 U3.29-201ENST00000391296 212 ntBASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 HMGN2P35-201ENST00000412164 270 ntBASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 AL139132.1-201ENST00000431587 344 ntBASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 AC011816.1-201ENST00000441346 546 ntBASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 SNRPGP6-201ENST00000451124 220 ntBASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 AIG1P1-201ENST00000503376 148 ntBASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 SNORA31.15-201ENST00000516771 132 ntBASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDCA4Q9BXL8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms