Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC009063.1-201ENST00000563342 702 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 HMGN1P30-201ENST00000589286 268 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC068790.3-201ENST00000602988 553 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC008739.3-201ENST00000603262 127 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC004492.1-201ENST00000607036 742 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC009159.1-201ENST00000618386 642 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC119674.1-207ENST00000641355 633 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC087190.4-201ENST00000574616 8334 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 FARSBP1-201ENST00000435808 1778 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AC106871.1-201ENST00000568324 3102 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 GNG5P1-201ENST00000255500 204 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 RNU1-108P-201ENST00000362556 161 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 RNU6-259P-201ENST00000383999 107 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 MIR513A2-201ENST00000385249 127 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 RNU2-8P-201ENST00000410727 190 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AC078974.1-201ENST00000411597 223 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 HMGN2P31-201ENST00000432430 273 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 MRPS18BP2-201ENST00000434310 759 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 KCTD9P3-201ENST00000434597 1169 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 PGBD4P3-201ENST00000440731 581 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AC234775.1-201ENST00000454247 670 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 RPL23AP41-201ENST00000484754 458 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AC123904.2-201ENST00000548059 300 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AC009101.1-201ENST00000568135 242 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 RNA5SP108-201ENST00000605921 117 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 SNORA62.6-201ENST00000606322 83 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AC108747.1-201ENST00000609508 535 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AC112204.3-201ENST00000623822 332 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AC067931.1-201ENST00000624190 671 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AC099654.13-201ENST00000639774 207 ntBASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.06□□□□□ -1.76
PAAF1Q9BRP4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 RNA5SP52-201ENST00000362448 134 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 SNORA63.1-201ENST00000362493 131 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 RNA5SP387-201ENST00000364226 106 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 ELOCP17-201ENST00000414751 326 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 BX295541.1-201ENST00000417774 250 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AL353777.1-201ENST00000425552 326 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 ISCA1P6-201ENST00000427740 390 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 USP9YP28-201ENST00000435142 589 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 GAPDHP17-201ENST00000449858 1001 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 snoU13.3-201ENST00000459441 104 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 HMGB1P25-201ENST00000468402 607 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AC096751.1-202ENST00000502691 1067 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 Y_RNA.672-201ENST00000516289 104 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AP003181.2-201ENST00000528941 181 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms